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Report for CCDS11486.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11486.1 Public Homo sapiens 17 ADAM11 24 110 108 CCDS HistoryNCBI Gene:4185Re-query CCDS DB by CCDS ID:11486.1Re-query CCDS DB by GeneID:4185See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11486.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000200557.11 ENSP00000200557.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000200557.11Link to Ensembl Protein Viewer:ENSP00000200557.6Re-query CCDS DB by Nucleotide ID:ENST00000200557Re-query CCDS DB by Protein ID:ENSP00000200557
Original member Current member NCBI NM_002390.6 NP_002381.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002390.6Link to Protein Sequence:NP_002381.2Re-query CCDS DB by Nucleotide ID:NM_002390Re-query CCDS DB by Protein ID:NP_002381Link to BLAST:NP_002381.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002381.2 769 O75078-1 769 100% 0 0

Chromosomal Locations for CCDS 11486.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 44759200 44759260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44759722 44759897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44769718 44769794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44769982 44770048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44771584 44771669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44771756 44771831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44772267 44772333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44772399 44772466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44772857 44772931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44773014 44773085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44773261 44773427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44774295 44774379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44774492 44774582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44774698 44774749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44775212 44775311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44775394 44775465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44775584 44775676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44776127 44776207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44776745 44776795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44776899 44776962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44777166 44777265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44777482 44777601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44777695 44777863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44777952 44778066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44778152 44778242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44779222 44779239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44779739 44779754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2310 nt):
ATGAGGCTGCTGCGGCGCTGGGCGTTCGCGGCTCTGCTGCTGTCGCTGCTCCCCACGCCCGGTCTTGGGA
CCCAAGGTCCTGCTGGAGCTCTGCGATGGGGGGGCTTACCCCAGCTGGGAGGCCCAGGAGCCCCTGAGGT
CACGGAACCCAGCCGTCTGGTTAGGGAGAGCTCCGGGGGAGAGGTCCGAAAGCAGCAGCTGGACACAAGG
GTCCGCCAGGAGCCACCAGGGGGCCCGCCTGTCCATCTGGCCCAGGTGAGTTTCGTCATCCCAGCCTTCA
ACTCAAACTTCACCCTGGACCTGGAGCTGAACCACCACCTCCTCTCCTCGCAATACGTGGAGCGCCACTT
CAGCCGGGAGGGGACAACCCAGCACAGCACCGGGGCTGGAGACCACTGCTACTACCAGGGGAAGCTCCGG
GGGAACCCGCACTCCTTCGCCGCCCTCTCCACCTGCCAGGGGCTGCATGGGGTCTTCTCTGATGGGAACT
TGACTTACATCGTGGAGCCCCAAGAGGTGGCTGGACCTTGGGGAGCCCCTCAGGGACCCCTTCCCCACCT
CATTTACCGGACCCCTCTCCTCCCAGATCCCCTCGGATGCAGGGAACCAGGCTGCCTGTTTGCTGTGCCT
GCCCAGTCGGCTCCTCCAAACCGGCCGAGGCTGAGAAGGAAAAGGCAGGTCCGCCGGGGCCACCCTACAG
TGCACAGTGAAACCAAGTATGTGGAGCTAATTGTGATCAACGACCACCAGCTGTTCGAGCAGATGCGACA
GTCGGTGGTCCTCACCAGCAACTTTGCCAAGTCCGTGGTGAACCTGGCCGATGTGATATACAAGGAGCAG
CTCAACACTCGCATCGTCCTGGTTGCCATGGAAACATGGGCAGATGGGGACAAGATCCAGGTGCAGGATG
ACCTCCTGGAGACCCTGGCCCGGCTCATGGTCTACCGACGGGAGGGTCTGCCTGAGCCCAGTGATGCCAC
CCACCTCTTCTCGGGCAGGACCTTCCAGAGCACGAGCAGCGGGGCAGCCTACGTGGGGGGCATATGCTCC
CTGTCCCACGGCGGGGGTGTGAACGAGTACGGCAACATGGGGGCGATGGCCGTGACCCTTGCCCAGACGC
TGGGACAGAACCTGGGCATGATGTGGAACAAACACCGGAGCTCGGCAGGGGACTGCAAGTGTCCAGACAT
CTGGCTGGGCTGCATCATGGAGGACACTGGGTTCTACCTGCCCCGCAAGTTCTCGCGCTGTAGCATCGAC
GAGTACAACCAGTTTCTGCAGGAGGGTGGTGGCAGCTGCCTCTTCAACAAGCCCCTCAAGCTCCTGGACC
CCCCAGAGTGCGGGAACGGCTTCGTGGAGGCAGGGGAGGAGTGCGACTGCGGCTCGGTGCAGGAGTGCAG
CCGCGCAGGTGGCAACTGCTGCAAGAAATGCACCCTGACTCACGACGCCATGTGCAGCGACGGGCTCTGC
TGTCGCCGCTGCAAGTACGAACCACGGGGTGTGTCCTGCCGAGAGGCCGTGAACGAGTGCGACATCGCGG
AGACCTGCACCGGGGACTCTAGCCAGTGCCCGCCTAACCTGCACAAGCTGGACGGTTACTACTGTGACCA
TGAGCAGGGCCGCTGCTACGGAGGTCGCTGCAAAACCCGGGACCGGCAGTGCCAGGTTCTTTGGGGCCAT
GCGGCTGCTGATCGCTTCTGCTACGAGAAGCTGAATGTGGAGGGGACGGAGCGTGGGAGCTGTGGGCGCA
AGGGATCTGGCTGGGTCCAGTGCAGTAAGCAGGACGTGCTGTGTGGCTTCCTCCTCTGTGTCAACATCTC
TGGAGCTCCTCGGCTAGGGGACCTGGTGGGAGACATCAGTAGTGTCACCTTCTACCACCAGGGCAAGGAG
CTGGACTGCAGGGGAGGCCACGTGCAGCTGGCGGACGGCTCTGACCTGAGCTATGTGGAGGATGGCACAG
CCTGCGGGCCTAACATGTTGTGCCTGGACCATCGCTGCCTGCCAGCTTCTGCCTTCAACTTCAGCACCTG
CCCCGGCAGTGGGGAGCGCCGGATTTGCTCCCACCACGGGGTCTGCAGCAATGAAGGGAAGTGCATCTGT
CAGCCAGACTGGACAGGCAAAGACTGCAGTATCCATAACCCCCTGCCCACGTCCCCACCCACGGGGGAGA
CGGAGAGATATAAAGGTCCCAGCGGCACCAACATCATCATTGGCTCCATTGCTGGGGCTGTCCTGGTTGC
AGCCATCGTCCTGGGCGGCACGGGCTGGGGATTTAAAAACATTCGCCGAGGAAGGTCCGGAGGGGCCTAA

Translation (769 aa):
MRLLRRWAFAALLLSLLPTPGLGTQGPAGALRWGGLPQLGGPGAPEVTEPSRLVRESSGGEVRKQQLDTR
VRQEPPGGPPVHLAQVSFVIPAFNSNFTLDLELNHHLLSSQYVERHFSREGTTQHSTGAGDHCYYQGKLR
GNPHSFAALSTCQGLHGVFSDGNLTYIVEPQEVAGPWGAPQGPLPHLIYRTPLLPDPLGCREPGCLFAVP
AQSAPPNRPRLRRKRQVRRGHPTVHSETKYVELIVINDHQLFEQMRQSVVLTSNFAKSVVNLADVIYKEQ
LNTRIVLVAMETWADGDKIQVQDDLLETLARLMVYRREGLPEPSDATHLFSGRTFQSTSSGAAYVGGICS
LSHGGGVNEYGNMGAMAVTLAQTLGQNLGMMWNKHRSSAGDCKCPDIWLGCIMEDTGFYLPRKFSRCSID
EYNQFLQEGGGSCLFNKPLKLLDPPECGNGFVEAGEECDCGSVQECSRAGGNCCKKCTLTHDAMCSDGLC
CRRCKYEPRGVSCREAVNECDIAETCTGDSSQCPPNLHKLDGYYCDHEQGRCYGGRCKTRDRQCQVLWGH
AAADRFCYEKLNVEGTERGSCGRKGSGWVQCSKQDVLCGFLLCVNISGAPRLGDLVGDISSVTFYHQGKE
LDCRGGHVQLADGSDLSYVEDGTACGPNMLCLDHRCLPASAFNFSTCPGSGERRICSHHGVCSNEGKCIC
QPDWTGKDCSIHNPLPTSPPTGETERYKGPSGTNIIIGSIAGAVLVAAIVLGGTGWGFKNIRRGRSGGA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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