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Report for CCDS11564.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11564.1 Public Homo sapiens 17 MRPL27 24 110 108 CCDS HistoryNCBI Gene:51264Re-query CCDS DB by CCDS ID:11564.1Re-query CCDS DB by GeneID:51264See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11564.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000225969.9 ENSP00000225969.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000225969.9Link to Ensembl Protein Viewer:ENSP00000225969.4Re-query CCDS DB by Nucleotide ID:ENST00000225969Re-query CCDS DB by Protein ID:ENSP00000225969
Original member Current member NCBI NM_016504.3 NP_057588.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016504.3Link to Protein Sequence:NP_057588.1Re-query CCDS DB by Nucleotide ID:NM_016504Re-query CCDS DB by Protein ID:NP_057588Link to BLAST:NP_057588.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057588.1 148 Q9P0M9 148 100% 0 0

Chromosomal Locations for CCDS 11564.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 50368092 50368298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50370032 50370099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50370455 50370586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50373131 50373170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (447 nt):
ATGGCGTCGGTGGTGTTGGCGCTGAGGACCCGGACAGCCGTTACATCCTTGCTAAGCCCCACTCCGGCTA
CAGCTCTTGCTGTCAGATACGCATCCAAGAAGTCGGGTGGTAGCTCCAAAAACCTCGGTGGAAAGTCATC
AGGCAGACGCCAAGGCATTAAGAAAATGGAAGGTCACTATGTTCATGCTGGGAACATCATTGCAACACAG
CGCCATTTCCGCTGGCACCCAGGTGCCCATGTGGGTGTTGGGAAGAATAAATGTCTGTATGCCCTGGAAG
AGGGGATAGTCCGCTACACTAAGGAGGTCTACGTGCCTCATCCCAGAAACACGGAGGCTGTGGATCTGAT
CACCAGGCTGCCCAAGGGTGCTGTGCTCTACAAGACTTTTGTCCACGTGGTTCCTGCCAAGCCTGAGGGC
ACCTTCAAACTGGTAGCTATGCTTTGA

Translation (148 aa):
MASVVLALRTRTAVTSLLSPTPATALAVRYASKKSGGSSKNLGGKSSGRRQGIKKMEGHYVHAGNIIATQ
RHFRWHPGAHVGVGKNKCLYALEEGIVRYTKEVYVPHPRNTEAVDLITRLPKGAVLYKTFVHVVPAKPEG
TFKLVAML


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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