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Report for CCDS11668.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11668.1 Public Homo sapiens 17 CACNG1 24 110 108 CCDS HistoryNCBI Gene:786Re-query CCDS DB by CCDS ID:11668.1Re-query CCDS DB by GeneID:786See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11668.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000226021.5 ENSP00000226021.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000226021.5Link to Ensembl Protein Viewer:ENSP00000226021.3Re-query CCDS DB by Nucleotide ID:ENST00000226021Re-query CCDS DB by Protein ID:ENSP00000226021
Original member Current member NCBI NM_000727.4 NP_000718.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000727.4Link to Protein Sequence:NP_000718.1Re-query CCDS DB by Nucleotide ID:NM_000727Re-query CCDS DB by Protein ID:NP_000718Link to BLAST:NP_000718.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000718.1 222 Q06432 222 100% 0 0

Chromosomal Locations for CCDS 11668.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 67044661 67044889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67053996 67054070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67055103 67055240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 67056045 67056271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (669 nt):
ATGTCCCAGACCAAAATGCTGAAGGTCCGCGTGACCCTCTTCTGCATCCTGGCAGGCATCGTGCTGGCCA
TGACAGCCGTGGTAACCGACCACTGGGCTGTGCTGAGCCCCCACATGGAGCACCACAACACTACCTGCGA
GGCGGCCCACTTCGGCCTCTGGCGGATTTGTACCAAGCGCATCCCCATGGACGACAGCAAGACCTGCGGG
CCCATCACCCTGCCCGGGGAGAAGAACTGTTCCTACTTCAGGCATTTTAACCCCGGCGAGAGCTCGGAGA
TCTTCGAATTCACCACTCAGAAGGAGTACAGCATCTCGGCAGCCGCCATCGCCATCTTCAGCCTTGGCTT
CATCATCCTGGGCAGCCTCTGTGTCCTCCTGTCCCTCGGGAAGAAGAGGGACTATCTGCTGCGACCCGCG
TCCATGTTCTATGCCTTTGCAGGTCTCTGCATCCTCGTCTCGGTGGAGGTCATGCGGCAGTCGGTGAAGC
GCATGATTGACAGTGAGGACACCGTCTGGATCGAGTACTATTACTCCTGGTCCTTTGCCTGCGCCTGTGC
CGCCTTCATCCTCCTCTTTCTCGGCGGTCTCGCCCTCCTGCTGTTCTCCCTGCCTCGAATGCCCCGGAAC
CCATGGGAGTCCTGCATGGATGCTGAGCCCGAGCACTAA

Translation (222 aa):
MSQTKMLKVRVTLFCILAGIVLAMTAVVTDHWAVLSPHMEHHNTTCEAAHFGLWRICTKRIPMDDSKTCG
PITLPGEKNCSYFRHFNPGESSEIFEFTTQKEYSISAAAIAIFSLGFIILGSLCVLLSLGKKRDYLLRPA
SMFYAFAGLCILVSVEVMRQSVKRMIDSEDTVWIEYYYSWSFACACAAFILLFLGGLALLLFSLPRMPRN
PWESCMDAEPEH


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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