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Report for CCDS1167.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1167.1 Public Homo sapiens 1 FCRL3 24 110 108 CCDS HistoryNCBI Gene:115352Re-query CCDS DB by CCDS ID:1167.1Re-query CCDS DB by GeneID:115352See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1167.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368184.8 ENSP00000357167.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000368184.8Link to Ensembl Protein Viewer:ENSP00000357167.3Re-query CCDS DB by Nucleotide ID:ENST00000368184Re-query CCDS DB by Protein ID:ENSP00000357167
Original member Current member EBI ENST00000485028.5 ENSP00000434331.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000485028.5Link to Ensembl Protein Viewer:ENSP00000434331.1Re-query CCDS DB by Nucleotide ID:ENST00000485028Re-query CCDS DB by Protein ID:ENSP00000434331
Original member Current member NCBI NM_052939.4 NP_443171.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_052939.4Link to Protein Sequence:NP_443171.2Re-query CCDS DB by Nucleotide ID:NM_052939Re-query CCDS DB by Protein ID:NP_443171Link to BLAST:NP_443171.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_443171.2 734 Q96P31-1 734 100% 0 0

Chromosomal Locations for CCDS 1167.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 157678710 157678856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157678942 157678973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157680702 157680770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157680981 157681099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157683217 157683244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157689798 157689917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157690255 157690533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157695329 157695607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157696040 157696327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157697140 157697424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157697659 157697919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157698384 157698629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157699692 157699712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157700459 157700489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2205 nt):
ATGCTTCTGTGGCTGCTGCTGCTGATCCTGACTCCTGGAAGAGAACAATCAGGGGTGGCCCCAAAAGCTG
TACTTCTCCTCAATCCTCCATGGTCCACAGCCTTCAAAGGAGAAAAAGTGGCTCTCATATGCAGCAGCAT
ATCACATTCCCTAGCCCAGGGAGACACATATTGGTATCACGATGAGAAGTTGTTGAAAATAAAACATGAC
AAGATCCAAATTACAGAGCCTGGAAATTACCAATGTAAGACCCGAGGATCCTCCCTCAGTGATGCCGTGC
ATGTGGAATTTTCACCTGACTGGCTGATCCTGCAGGCTTTACATCCTGTCTTTGAAGGAGACAATGTCAT
TCTGAGATGTCAGGGGAAAGACAACAAAAACACTCATCAAAAGGTTTACTACAAGGATGGAAAACAGCTT
CCTAATAGTTATAATTTAGAGAAGATCACAGTGAATTCAGTCTCCAGGGATAATAGCAAATATCATTGTA
CTGCTTATAGGAAGTTTTACATACTTGACATTGAAGTAACTTCAAAACCCCTAAATATCCAAGTTCAAGA
GCTGTTTCTACATCCTGTGCTGAGAGCCAGCTCTTCCACGCCCATAGAGGGGAGTCCCATGACCCTGACC
TGTGAGACCCAGCTCTCTCCACAGAGGCCAGATGTCCAGCTGCAATTCTCCCTCTTCAGAGATAGCCAGA
CCCTCGGATTGGGCTGGAGCAGGTCCCCCAGACTCCAGATCCCTGCCATGTGGACTGAAGACTCAGGGTC
TTACTGGTGTGAGGTGGAGACAGTGACTCACAGCATCAAAAAAAGGAGCCTGAGATCTCAGATACGTGTA
CAGAGAGTCCCTGTGTCTAATGTGAATCTAGAGATCCGGCCCACCGGAGGGCAGCTGATTGAAGGAGAAA
ATATGGTCCTTATTTGCTCAGTAGCCCAGGGTTCAGGGACTGTCACATTCTCCTGGCACAAAGAAGGAAG
AGTAAGAAGCCTGGGTAGAAAGACCCAGCGTTCCCTGTTGGCAGAGCTGCATGTTCTCACCGTGAAGGAG
AGTGATGCAGGGAGATACTACTGTGCAGCTGATAACGTTCACAGCCCCATCCTCAGCACGTGGATTCGAG
TCACCGTGAGAATTCCGGTATCTCACCCTGTCCTCACCTTCAGGGCTCCCAGGGCCCACACTGTGGTGGG
GGACCTGCTGGAGCTTCACTGTGAGTCCCTGAGAGGCTCTCCCCCGATCCTGTACCGATTTTATCATGAG
GATGTCACCCTGGGGAACAGCTCAGCCCCCTCTGGAGGAGGAGCCTCCTTCAACCTCTCTCTGACTGCAG
AACATTCTGGAAACTACTCCTGTGATGCAGACAATGGCCTGGGGGCCCAGCACAGTCATGGAGTGAGTCT
CAGGGTCACAGTTCCGGTGTCTCGCCCCGTCCTCACCCTCAGGGCTCCCGGGGCCCAGGCTGTGGTGGGG
GACCTGCTGGAGCTTCACTGTGAGTCCCTGAGAGGCTCCTTCCCGATCCTGTACTGGTTTTATCACGAGG
ATGACACCTTGGGGAACATCTCGGCCCACTCTGGAGGAGGGGCATCCTTCAACCTCTCTCTGACTACAGA
ACATTCTGGAAACTACTCATGTGAGGCTGACAATGGCCTGGGGGCCCAGCACAGTAAAGTGGTGACACTC
AATGTTACAGGAACTTCCAGGAACAGAACAGGCCTTACCGCTGCGGGAATCACGGGGCTGGTGCTCAGCA
TCCTCGTCCTTGCTGCTGCTGCTGCTCTGCTGCATTACGCCAGGGCCCGAAGGAAACCAGGAGGACTTTC
TGCCACTGGAACATCTAGTCACAGTCCTAGTGAGTGTCAGGAGCCTTCCTCGTCCAGGCCTTCCAGGATA
GACCCTCAAGAGCCCACTCACTCTAAACCACTAGCCCCAATGGAGCTGGAGCCAATGTACAGCAATGTAA
ATCCTGGAGATAGCAACCCGATTTATTCCCAGATCTGGAGCATCCAGCATACAAAAGAAAACTCAGCTAA
TTGTCCAATGATGCATCAAGAGCATGAGGAACTTACAGTCCTCTATTCAGAACTGAAGAAGACACACCCA
GACGACTCTGCAGGGGAGGCTAGCAGCAGAGGCAGGGCCCATGAAGAAGATGATGAAGAAAACTATGAGA
ATGTACCACGTGTATTACTGGCCTCAGACCACTAG

Translation (734 aa):
MLLWLLLLILTPGREQSGVAPKAVLLLNPPWSTAFKGEKVALICSSISHSLAQGDTYWYHDEKLLKIKHD
KIQITEPGNYQCKTRGSSLSDAVHVEFSPDWLILQALHPVFEGDNVILRCQGKDNKNTHQKVYYKDGKQL
PNSYNLEKITVNSVSRDNSKYHCTAYRKFYILDIEVTSKPLNIQVQELFLHPVLRASSSTPIEGSPMTLT
CETQLSPQRPDVQLQFSLFRDSQTLGLGWSRSPRLQIPAMWTEDSGSYWCEVETVTHSIKKRSLRSQIRV
QRVPVSNVNLEIRPTGGQLIEGENMVLICSVAQGSGTVTFSWHKEGRVRSLGRKTQRSLLAELHVLTVKE
SDAGRYYCAADNVHSPILSTWIRVTVRIPVSHPVLTFRAPRAHTVVGDLLELHCESLRGSPPILYRFYHE
DVTLGNSSAPSGGGASFNLSLTAEHSGNYSCDADNGLGAQHSHGVSLRVTVPVSRPVLTLRAPGAQAVVG
DLLELHCESLRGSFPILYWFYHEDDTLGNISAHSGGGASFNLSLTTEHSGNYSCEADNGLGAQHSKVVTL
NVTGTSRNRTGLTAAGITGLVLSILVLAAAAALLHYARARRKPGGLSATGTSSHSPSECQEPSSSRPSRI
DPQEPTHSKPLAPMELEPMYSNVNPGDSNPIYSQIWSIQHTKENSANCPMMHQEHEELTVLYSELKKTHP
DDSAGEASSRGRAHEEDDEENYENVPRVLLASDH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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