NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS1192.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1192.1 Public Homo sapiens 1 PIGM 24 110 108 CCDS HistoryNCBI Gene:93183Re-query CCDS DB by CCDS ID:1192.1Re-query CCDS DB by GeneID:93183See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1192.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368090.5 ENSP00000357069.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000368090.5Link to Ensembl Protein Viewer:ENSP00000357069.2Re-query CCDS DB by Nucleotide ID:ENST00000368090Re-query CCDS DB by Protein ID:ENSP00000357069
Original member Current member NCBI NM_145167.3 NP_660150.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145167.3Link to Protein Sequence:NP_660150.1Re-query CCDS DB by Nucleotide ID:NM_145167Re-query CCDS DB by Protein ID:NP_660150Link to BLAST:NP_660150.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_660150.1 423 Q9H3S5 423 100% 0 0

Chromosomal Locations for CCDS 1192.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 160030468 160031739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1272 nt):
ATGGGCTCCACCAAGCACTGGGGCGAATGGCTCCTGAACTTGAAGGTGGCTCCAGCCGGCGTCTTTGGTG
TGGCCTTTCTAGCCAGAGTCGCCCTGGTTTTCTATGGCGTCTTCCAGGACCGGACCCTGCACGTGAGGTA
TACGGACATCGACTACCAGGTCTTCACCGACGCCGCGCGCTTCGTCACGGAGGGGCGCTCGCCTTACCTG
AGAGCCACGTACCGTTACACCCCGCTGCTGGGTTGGCTCCTCACTCCCAACATCTACCTCAGCGAGCTCT
TTGGAAAGTTTCTCTTCATCAGCTGCGACCTCCTCACCGCTTTCCTCTTATACCGCCTGCTGCTGCTGAA
GGGGCTGGGGCGCCGCCAGGCTTGTGGCTACTGTGTCTTTTGGCTTCTTAACCCCCTGCCTATGGCAGTA
TCCAGCCGCGGTAATGCGGACTCTATTGTCGCCTCCCTGGTCCTGATGGTCCTCTACTTGATAAAGAAAA
GACTCGTCGCGTGTGCAGCTGTATTCTATGGTTTCGCGGTGCATATGAAGATATATCCAGTGACTTACAT
CCTTCCCATAACCCTCCACCTGCTTCCAGATCGCGACAATGACAAAAGCCTCCGTCAATTCCGGTACACT
TTCCAGGCTTGTTTGTACGAGCTCCTGAAAAGGCTGTGTAATCGGGCTGTGCTGCTGTTTGTAGCAGTTG
CTGGACTCACGTTTTTTGCCCTGAGCTTTGGTTTTTACTATGAGTACGGCTGGGAATTTTTGGAACACAC
CTACTTTTATCACCTGACTAGGCGGGATATCCGTCACAACTTTTCTCCGTACTTCTACATGCTGTATTTG
ACTGCAGAGAGCAAGTGGAGTTTTTCCCTGGGAATTGCTGCATTCCTGCCACAGCTCATCTTGCTTTCAG
CTGTGTCTTTCGCCTATTACAGAGACCTCGTTTTTTGTTGTTTTCTTCATACGTCCATTTTTGTGACTTT
TAACAAAGTCTGCACCTCCCAGTACTTTCTTTGGTACCTCTGCTTACTGCCTCTTGTGATGCCACTAGTC
AGAATGCCTTGGAAAAGAGCTGTAGTTCTCCTAATGTTATGGTTTATAGGGCAGGCCATGTGGCTGGCTC
CTGCCTATGTTCTAGAGTTTCAAGGAAAGAACACCTTTCTGTTTATTTGGTTAGCTGGTTTGTTCTTTCT
TCTTATCAATTGTTCCATCCTGATTCAAATTATTTCCCATTACAAAGAAGAACCCCTGACAGAGAGAATC
AAATATGACTAG

Translation (423 aa):
MGSTKHWGEWLLNLKVAPAGVFGVAFLARVALVFYGVFQDRTLHVRYTDIDYQVFTDAARFVTEGRSPYL
RATYRYTPLLGWLLTPNIYLSELFGKFLFISCDLLTAFLLYRLLLLKGLGRRQACGYCVFWLLNPLPMAV
SSRGNADSIVASLVLMVLYLIKKRLVACAAVFYGFAVHMKIYPVTYILPITLHLLPDRDNDKSLRQFRYT
FQACLYELLKRLCNRAVLLFVAVAGLTFFALSFGFYYEYGWEFLEHTYFYHLTRRDIRHNFSPYFYMLYL
TAESKWSFSLGIAAFLPQLILLSAVSFAYYRDLVFCCFLHTSIFVTFNKVCTSQYFLWYLCLLPLVMPLV
RMPWKRAVVLLMLWFIGQAMWLAPAYVLEFQGKNTFLFIWLAGLFFLLINCSILIQIISHYKEEPLTERI
KYD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH