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Report for CCDS11949.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11949.1 Public Homo sapiens 18 ELAC1 24 110 108 CCDS HistoryNCBI Gene:55520Re-query CCDS DB by CCDS ID:11949.1Re-query CCDS DB by GeneID:55520See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11949.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000269466.8 ENSP00000269466.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000269466.8Link to Ensembl Protein Viewer:ENSP00000269466.3Re-query CCDS DB by Nucleotide ID:ENST00000269466Re-query CCDS DB by Protein ID:ENSP00000269466
Original member Current member NCBI NM_018696.3 NP_061166.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018696.3Link to Protein Sequence:NP_061166.1Re-query CCDS DB by Nucleotide ID:NM_018696Re-query CCDS DB by Protein ID:NP_061166Link to BLAST:NP_061166.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061166.1 363 Q9H777 363 100% 0 0

Chromosomal Locations for CCDS 11949.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 50974405 50974561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 50984096 50984563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 50986619 50987085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1092 nt):
ATGTCTATGGATGTGACATTCCTGGGGACGGGTGCAGCATACCCATCTCCAACCCGGGGTGCCTCTGCTG
TGGTCCTTCGGTGTGAAGGCGAGTGCTGGCTCTTTGACTGTGGGGAGGGAACACAGACACAGCTTATGAA
AAGCCAACTTAAAGCAGGGAGAATTACCAAGATCTTCATCACACACCTTCATGGAGACCATTTCTTTGGC
CTTCCTGGGCTCCTCTGCACAATCAGCCTGCAGAGTGGCTCCATGGTGTCCAAACAGCCTATTGAAATCT
ATGGCCCTGTAGGGCTTCGGGACTTTATCTGGCGAACCATGGAACTCTCTCACACGGAGCTGGTCTTCCA
TTATGTGGTTCATGAACTGGTTCCTACAGCAGATCAATGTCCTGCAGAAGAACTAAAAGAATTTGCGCAT
GTGAATAGAGCAGACAGTCCTCCCAAAGAGGAACAAGGAAGAACTATCCTGTTAGACTCAGAAGAAAACT
CATACCTTCTGTTTGATGATGAACAATTTGTTGTAAAAGCATTTCGCCTCTTTCACAGAATTCCCTCATT
TGGGTTTTCAGTCGTGGAAAAGAAACGCCCAGGTAAACTCAATGCACAGAAACTTAAAGACCTTGGTGTT
CCACCAGGTCCTGCCTATGGGAAGCTGAAAAATGGAATTTCTGTTGTTCTGGAAAATGGGGTTACAATTT
CTCCCCAAGATGTCTTAAAAAAGCCTATTGTTGGAAGAAAAATCTGCATATTGGGTGACTGCTCTGGGGT
TGTGGGTGATGGAGGAGTAAAACTGTGCTTTGAAGCAGACCTGTTGATCCACGAAGCAACCCTGGATGAT
GCCCAGATGGACAAAGCAAAGGAGCATGGCCACAGCACACCACAGATGGCAGCAACATTTGCAAAGTTGT
GCCGTGCAAAGAGGCTGGTTCTGACTCACTTCAGTCAGAGGTACAAACCAGTTGCCTTGGCCAGAGAAGG
AGAAACAGATGGCATTGCAGAACTAAAAAAGCAAGCTGAATCAGTGTTAGATCTCCAAGAAGTGACTCTA
GCAGAAGATTTTATGGTGATAAGCATTCCAATCAAGAAATGA

Translation (363 aa):
MSMDVTFLGTGAAYPSPTRGASAVVLRCEGECWLFDCGEGTQTQLMKSQLKAGRITKIFITHLHGDHFFG
LPGLLCTISLQSGSMVSKQPIEIYGPVGLRDFIWRTMELSHTELVFHYVVHELVPTADQCPAEELKEFAH
VNRADSPPKEEQGRTILLDSEENSYLLFDDEQFVVKAFRLFHRIPSFGFSVVEKKRPGKLNAQKLKDLGV
PPGPAYGKLKNGISVVLENGVTISPQDVLKKPIVGRKICILGDCSGVVGDGGVKLCFEADLLIHEATLDD
AQMDKAKEHGHSTPQMAATFAKLCRAKRLVLTHFSQRYKPVALAREGETDGIAELKKQAESVLDLQEVTL
AEDFMVISIPIKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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