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Report for CCDS12075.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12075.1 Public Homo sapiens 19 KLF16 24 110 108 CCDS HistoryNCBI Gene:83855Re-query CCDS DB by CCDS ID:12075.1Re-query CCDS DB by GeneID:83855See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12075.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000250916.6 ENSP00000250916.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000250916.6Link to Ensembl Protein Viewer:ENSP00000250916.3Re-query CCDS DB by Nucleotide ID:ENST00000250916Re-query CCDS DB by Protein ID:ENSP00000250916
Original member Current member EBI ENST00000541015.5 ENSP00000439973.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000541015.5Link to Ensembl Protein Viewer:ENSP00000439973.1Re-query CCDS DB by Nucleotide ID:ENST00000541015Re-query CCDS DB by Protein ID:ENSP00000439973
Original member Current member EBI ENST00000617223.1 ENSP00000483701.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000617223.1Link to Ensembl Protein Viewer:ENSP00000483701.1Re-query CCDS DB by Nucleotide ID:ENST00000617223Re-query CCDS DB by Protein ID:ENSP00000483701
Original member Current member NCBI NM_031918.4 NP_114124.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_031918.4Link to Protein Sequence:NP_114124.1Re-query CCDS DB by Nucleotide ID:NM_031918Re-query CCDS DB by Protein ID:NP_114124Link to BLAST:NP_114124.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_114124.1 252 Q9BXK1 252 100% 0 0

Chromosomal Locations for CCDS 12075.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 1854459 1854760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1863041 1863497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (759 nt):
ATGTCGGCGGCCGTGGCGTGCGTGGATTACTTCGCCGCCGACGTGCTCATGGCCATCTCTTCGGGCGCCG
TGGTGCACCGCGGGCGGCCCGGCCCCGAGGGCGCGGGCCCCGCCGCCGGCCTGGATGTGCGCGCGGCGCG
CCGCGAGGCCGCCTCACCCGGGACCCCGGGGCCACCCCCGCCGCCCCCCGCCGCTTCTGGCCCGGGCCCC
GGCGCCGCCGCGGCGCCCCACCTGCTGGCCGCCAGCATCCTGGCCGACCTGCGCGGCGGACCCGGAGCCG
CCCCGGGGGGCGCCTCGCCCGCCTCCTCCTCCTCAGCCGCCTCGTCCCCGTCCTCGGGCCGCGCCCCCGG
CGCCGCGCCCTCCGCCGCCGCCAAGAGCCACCGCTGTCCCTTCCCGGACTGCGCCAAAGCCTACTACAAG
TCCTCGCACCTAAAGTCGCACCTGCGGACGCACACAGGGGAACGCCCTTTTGCTTGTGACTGGCAGGGCT
GCGACAAGAAGTTCGCCCGCTCCGACGAGCTGGCCCGCCACCACCGGACGCACACGGGCGAGAAGCGCTT
CTCCTGCCCTCTGTGCTCCAAGCGCTTCACCCGCAGTGACCACCTGGCCAAGCACGCCCGCCGCCACCCC
GGCTTCCACCCGGACCTGCTCCGGCGCCCTGGTGCCCGCAGTACCTCCCCCAGCGACTCGCTGCCCTGCA
GCCTGGCCGGGAGCCCTGCGCCCAGCCCCGCGCCCAGCCCAGCCCCCGCAGGCCTGTAG

Translation (252 aa):
MSAAVACVDYFAADVLMAISSGAVVHRGRPGPEGAGPAAGLDVRAARREAASPGTPGPPPPPPAASGPGP
GAAAAPHLLAASILADLRGGPGAAPGGASPASSSSAASSPSSGRAPGAAPSAAAKSHRCPFPDCAKAYYK
SSHLKSHLRTHTGERPFACDWQGCDKKFARSDELARHHRTHTGEKRFSCPLCSKRFTRSDHLAKHARRHP
GFHPDLLRRPGARSTSPSDSLPCSLAGSPAPSPAPSPAPAGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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