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Report for CCDS12319.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12319.1 Public Homo sapiens 19 OR7A17 24 110 108 CCDS HistoryNCBI Gene:26333Re-query CCDS DB by CCDS ID:12319.1Re-query CCDS DB by GeneID:26333See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12319.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000642123.1 ENSP00000493071.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000642123.1Link to Ensembl Protein Viewer:ENSP00000493071.1Re-query CCDS DB by Nucleotide ID:ENST00000642123Re-query CCDS DB by Protein ID:ENSP00000493071
Original member Current member EBI ENST00000641113.1 ENSP00000493283.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641113.1Link to Ensembl Protein Viewer:ENSP00000493283.1Re-query CCDS DB by Nucleotide ID:ENST00000641113Re-query CCDS DB by Protein ID:ENSP00000493283
Original member Current member NCBI NM_030901.2 NP_112163.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_030901.2Link to Protein Sequence:NP_112163.1Re-query CCDS DB by Nucleotide ID:NM_030901Re-query CCDS DB by Protein ID:NP_112163Link to BLAST:NP_112163.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_112163.1 309 O14581 309 100% 0 0

Chromosomal Locations for CCDS 12319.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 14880426 14881355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (930 nt):
ATGGAACCAGAGAATGACACAGGGATTTCAGAATTTGTTCTTCTGGGACTTTCTGAGGAACCAGAATTGC
AGCCCTTCCTCTTTGGGCTGTTTCTGTCCATGTACCTGGTCACTGTGCTCGGGAATCTGCTCATCATCCT
GGCCACAATCTCAGACTCCCACCTCCACACCCCCATGTACTTCTTCCTCTCCAACCTGTCCTTTGCAGAC
ATCTGTTTCATCTCCACTACAATCCCAAAGATGCTCATTAACATCCAGACACAGAGCAGAGTCATCACCT
ATGCAGGCTGCATCACCCAGATGTGCTTTTTTGTACTTTTTGGAGGGTTAGACAGCTTACTCCTGGCTGT
GATGGCCTATGATCGGTTTGTGGCCATCTGTCATCCTCTGCACTACACAGTCATCATGAACCCTCGGCTC
TGTGGACTCCTGGTTCTGGCATCCTGGATGATTGCTGCCCTGAATTCCTTGTCACAAAGCTTAATGGTAT
TGTGGCTGTCCTTCTGCACAGACTTGGAAATCCCCCACTTTTTCTGTGAACTTAATCAGGTCATCCACCT
TGCCTGTTCTGACACCTTTCTTAATGACATGGGGATGTATTTTGCAGCAGGGCTGCTGGCTGGTGGTCCC
CTTGTGGGGATCCTTTGCTCTTACTCTAAGATAGTTTCCTCCATACGTGCAATCTCATCAGCTCAGGGGA
AGTACAAGGCATTTTCCACCTGTGCATCACACCTCTCAGTTGTCTCTTTATTTTGTTGTACGGGCCTAGG
TGTGTACCTTACTTCTGCTGCAACCCACAACTCACACACAAGTGCAACAGCCTCAGTGATGTACACTGTG
GCCACCCCCATGCTGAACCCCTTTATCTACAGTCTGAGGAATAAAGACATAAAGAGGGCTCTGAAAATGT
CCTTCAGAGGAAAGCAATAA

Translation (309 aa):
MEPENDTGISEFVLLGLSEEPELQPFLFGLFLSMYLVTVLGNLLIILATISDSHLHTPMYFFLSNLSFAD
ICFISTTIPKMLINIQTQSRVITYAGCITQMCFFVLFGGLDSLLLAVMAYDRFVAICHPLHYTVIMNPRL
CGLLVLASWMIAALNSLSQSLMVLWLSFCTDLEIPHFFCELNQVIHLACSDTFLNDMGMYFAAGLLAGGP
LVGILCSYSKIVSSIRAISSAQGKYKAFSTCASHLSVVSLFCCTGLGVYLTSAATHNSHTSATASVMYTV
ATPMLNPFIYSLRNKDIKRALKMSFRGKQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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