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Report for CCDS12562.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12562.1 Public Homo sapiens 19 COQ8B 24 110 108 CCDS HistoryNCBI Gene:79934Re-query CCDS DB by CCDS ID:12562.1Re-query CCDS DB by GeneID:79934See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12562.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324464.8 ENSP00000315118.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000324464.8Link to Ensembl Protein Viewer:ENSP00000315118.3Re-query CCDS DB by Nucleotide ID:ENST00000324464Re-query CCDS DB by Protein ID:ENSP00000315118
Original member Current member EBI ENST00000594720.6 ENSP00000470876.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000594720.6Link to Ensembl Protein Viewer:ENSP00000470876.2Re-query CCDS DB by Nucleotide ID:ENST00000594720Re-query CCDS DB by Protein ID:ENSP00000470876
Original member Current member EBI ENST00000601967.6 ENSP00000470916.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000601967.6Link to Ensembl Protein Viewer:ENSP00000470916.2Re-query CCDS DB by Nucleotide ID:ENST00000601967Re-query CCDS DB by Protein ID:ENSP00000470916
Original member Current member EBI ENST00000677018.1 ENSP00000503480.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000677018.1Link to Ensembl Protein Viewer:ENSP00000503480.1Re-query CCDS DB by Nucleotide ID:ENST00000677018Re-query CCDS DB by Protein ID:ENSP00000503480
Original member Current member EBI ENST00000678404.1 ENSP00000503944.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678404.1Link to Ensembl Protein Viewer:ENSP00000503944.1Re-query CCDS DB by Nucleotide ID:ENST00000678404Re-query CCDS DB by Protein ID:ENSP00000503944
Original member Current member EBI ENST00000678467.1 ENSP00000504072.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678467.1Link to Ensembl Protein Viewer:ENSP00000504072.1Re-query CCDS DB by Nucleotide ID:ENST00000678467Re-query CCDS DB by Protein ID:ENSP00000504072
Original member Current member EBI ENST00000678419.1 ENSP00000504085.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678419.1Link to Ensembl Protein Viewer:ENSP00000504085.1Re-query CCDS DB by Nucleotide ID:ENST00000678419Re-query CCDS DB by Protein ID:ENSP00000504085
Original member Current member EBI ENST00000679130.1 ENSP00000504845.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679130.1Link to Ensembl Protein Viewer:ENSP00000504845.1Re-query CCDS DB by Nucleotide ID:ENST00000679130Re-query CCDS DB by Protein ID:ENSP00000504845
Original member Current member NCBI NM_024876.4 NP_079152.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024876.4Link to Protein Sequence:NP_079152.3Re-query CCDS DB by Nucleotide ID:NM_024876Re-query CCDS DB by Protein ID:NP_079152Link to BLAST:NP_079152.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079152.3 544 Q96D53-1 544 100% 0 0

Chromosomal Locations for CCDS 12562.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 40692035 40692373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40692951 40693037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40695989 40696054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40700067 40700174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40700310 40700451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40702600 40702693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40703541 40703622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40703715 40703855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40705096 40705181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40705325 40705447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40710059 40710136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40714067 40714133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40714278 40714397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40714531 40714632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1635 nt):
ATGTGGCTGAAGGTGGGGGGCCTACTTCGGGGGACCGGTGGACAGCTGGGCCAGACTGTTGGTTGGCCTT
GTGGGGCCCTGGGGCCTGGGCCCCACCGCTGGGGACCATGTGGAGGTTCTTGGGCCCAAAAGTTTTACCA
GGATGGGCCTGGGAGAGGCCTGGGTGAGGAGGACATTCGCAGGGCACGGGAGGCCCGTCCCAGGAAGACA
CCCCGGCCCCAGCTGAGTGACCGCTCTCGAGAACGCAAGGTGCCTGCCTCCCGCATCAGCCGCTTGGCCA
ACTTTGGGGGACTGGCTGTGGGCTTGGGGCTAGGAGTACTGGCCGAGATGGCTAAGAAGTCCATGCCAGG
AGGTCGTCTGCAGTCAGAGGGTGGTTCTGGGCTGGACTCCAGCCCCTTCCTGTCGGAGGCCAATGCCGAG
CGGATTGTGCAGACCTTATGTACAGTTCGAGGGGCCGCCCTCAAGGTTGGCCAGATGCTCAGCATCCAGG
ACAACAGCTTCATCAGCCCTCAGCTGCAGCACATCTTTGAGCGGGTCCGCCAGAGCGCCGACTTCATGCC
CCGCTGGCAGATGCTGAGAGTTCTTGAAGAGGAGCTCGGCAGGGACTGGCAGGCCAAGGTGGCCTCCTTG
GAGGAGGTGCCCTTTGCCGCTGCCTCAATTGGGCAGGTGCACCAGGGCCTGCTGAGGGACGGGACGGAGG
TGGCCGTGAAGATCCAGTACCCCGGCATAGCCCAGAGCATTCAGAGCGATGTCCAGAACCTGCTGGCGGT
ACTCAAGATGAGCGCGGCCCTGCCCGCGGGCCTGTTTGCCGAGCAGAGCCTGCAGGCCTTGCAGCAGGAG
CTGGCTTGGGAGTGTGACTACCGTCGTGAGGCGGCTTGTGCCCAGAATTTCAGGCAGCTGCTGGCAAATG
ACCCCTTCTTCCGGGTCCCAGCCGTGGTTAAGGAGCTGTGCACGACACGGGTGCTGGGCATGGAGCTGGC
TGGAGGGGTCCCCCTGGACCAGTGCCAGGGCCTAAGCCAGGACCTGCGGAACCAGATTTGCTTCCAGCTC
CTGACGCTGTGTCTGCGGGAGCTGTTTGAGTTCCGATTCATGCAGACTGACCCCAACTGGGCCAACTTCC
TGTATGATGCCTCCAGCCACCAGGTGACCCTGCTGGACTTTGGTGCAAGCCGGGAGTTTGGGACAGAGTT
CACAGACCATTACATCGAGGTGGTGAAGGCTGCAGCTGATGGAGACAGAGACTGTGTCCTGCAGAAGTCC
AGGGACCTCAAATTCCTCACAGGCTTTGAAACCAAGGCATTCTCCGACGCCCACGTGGAGGCAGTGATGA
TCCTGGGGGAGCCTTTCGCCACCCAGGGCCCTTATGACTTTGGGTCGGGGGAAACGGCCCGCCGCATACA
GGACCTCATCCCGGTGCTGCTGCGGCACCGGCTGTGTCCCCCACCCGAGGAGACCTATGCCCTGCACCGC
AAGCTGGCAGGGGCTTTCCTGGCCTGTGCCCACCTCCGAGCCCACATCGCCTGCAGGGACCTCTTCCAGG
ACACCTACCACCGCTACTGGGCCAGTCGCCAGCCAGACGCAGCCACTGCCGGCAGCCTCCCCACCAAAGG
GGACTCCTGGGTGGATCCCTCATGA

Translation (544 aa):
MWLKVGGLLRGTGGQLGQTVGWPCGALGPGPHRWGPCGGSWAQKFYQDGPGRGLGEEDIRRAREARPRKT
PRPQLSDRSRERKVPASRISRLANFGGLAVGLGLGVLAEMAKKSMPGGRLQSEGGSGLDSSPFLSEANAE
RIVQTLCTVRGAALKVGQMLSIQDNSFISPQLQHIFERVRQSADFMPRWQMLRVLEEELGRDWQAKVASL
EEVPFAAASIGQVHQGLLRDGTEVAVKIQYPGIAQSIQSDVQNLLAVLKMSAALPAGLFAEQSLQALQQE
LAWECDYRREAACAQNFRQLLANDPFFRVPAVVKELCTTRVLGMELAGGVPLDQCQGLSQDLRNQICFQL
LTLCLRELFEFRFMQTDPNWANFLYDASSHQVTLLDFGASREFGTEFTDHYIEVVKAAADGDRDCVLQKS
RDLKFLTGFETKAFSDAHVEAVMILGEPFATQGPYDFGSGETARRIQDLIPVLLRHRLCPPPEETYALHR
KLAGAFLACAHLRAHIACRDLFQDTYHRYWASRQPDAATAGSLPTKGDSWVDPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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