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Report for CCDS13384.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13384.1 Public Homo sapiens 20 NEURL2 24 110 108 CCDS HistoryNCBI Gene:140825Re-query CCDS DB by CCDS ID:13384.1Re-query CCDS DB by GeneID:140825See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 13384.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372518.5 ENSP00000361596.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372518.5Link to Ensembl Protein Viewer:ENSP00000361596.4Re-query CCDS DB by Nucleotide ID:ENST00000372518Re-query CCDS DB by Protein ID:ENSP00000361596
Original member Current member NCBI NM_080749.4 NP_542787.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_080749.4Link to Protein Sequence:NP_542787.1Re-query CCDS DB by Nucleotide ID:NM_080749Re-query CCDS DB by Protein ID:NP_542787Link to BLAST:NP_542787.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_542787.1 285 Q9BR09 285 100% 0 0

Chromosomal Locations for CCDS 13384.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 45888758 45888873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45890250 45890991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (858 nt):
ATGGCTGCTGCCTCCGAGCCCGTGGATTCGGGTGCACTCTGGGGACTCGAGCGCCCGGAGCCCCCTCCCA
CCCGCTTCCATCGGGTGCACGGTGCCAACATCCGCGTGGACCCCTCTGGGACGCGGGCCACACGCGTGGA
GAGCTTCGCCCACGGCGTGTGCTTCAGCCGCGAGCCGCTGGCCCCGGGCCAGGTCTTCCTGGTCGAGATC
GAGGAGAAAGAGCTGGGCTGGTGCGGACATCTGCGTCTCGGTCTGACCGCGCTGGACCCCGCCAGTCTGG
CCCCCGTTCCCGAGTTTTCTCTGCCCGATCTGGTCAACCTGGGCCACACCTGGGTCTTCGCCATCACGCG
CCACCACAACCGCGTGCCCCGGGAGGGCCGCCCGGAGGCGGAGGCAGCGGCCCCCAGCCGACCTCCAACC
CTCCTCGTGGAACCATATCTGCGCATTGAGCAGTTTCGCATTCCCCGGGACCGCCTGGTGGGCCGCAGCC
GGCCAGGGCTCTACAGCCATCTCTTGGACCAGCTCTATGAGCTGAACGTGCTGCCTCCGACCGCGCGCCG
TAGCCGCCTGGGTGTCCTCTTTTGCCCGCGCCCCGATGGCACGGCCGACATGCACATCATCATCAACGGC
GAGGACATGGGCCCGAGCGCCCGGGGACTGCCAGCTGCGCAGCCCCTCTACGCGGTGGTGGACGTGTTTG
CTTCCACAAAGAGCGTGCGCCTTGTCCAGCTCGAGTATGGCTTGCCATCCCTGCAGACTCTGTGCCGCCT
AGTGATACAAAGGAGCATGGTGCACCGGCTGGCCATTGATGGGCTCCACCTGCCCAAAGAACTTAAGGAT
TTCTGCAAGTATGAGTGA

Translation (285 aa):
MAAASEPVDSGALWGLERPEPPPTRFHRVHGANIRVDPSGTRATRVESFAHGVCFSREPLAPGQVFLVEI
EEKELGWCGHLRLGLTALDPASLAPVPEFSLPDLVNLGHTWVFAITRHHNRVPREGRPEAEAAAPSRPPT
LLVEPYLRIEQFRIPRDRLVGRSRPGLYSHLLDQLYELNVLPPTARRSRLGVLFCPRPDGTADMHIIING
EDMGPSARGLPAAQPLYAVVDVFASTKSVRLVQLEYGLPSLQTLCRLVIQRSMVHRLAIDGLHLPKELKD
FCKYE


Links Key
 Links to:   History report
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  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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