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Report for CCDS13731.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13731.1 Public Homo sapiens 21 FTCD 24 110 108 CCDS HistoryNCBI Gene:10841Re-query CCDS DB by CCDS ID:13731.1Re-query CCDS DB by GeneID:10841See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13731.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000291670.9 ENSP00000291670.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000291670.9Link to Ensembl Protein Viewer:ENSP00000291670.5Re-query CCDS DB by Nucleotide ID:ENST00000291670Re-query CCDS DB by Protein ID:ENSP00000291670
Original member Current member EBI ENST00000397746.8 ENSP00000380854.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000397746.8Link to Ensembl Protein Viewer:ENSP00000380854.3Re-query CCDS DB by Nucleotide ID:ENST00000397746Re-query CCDS DB by Protein ID:ENSP00000380854
Original member Current member NCBI NM_006657.3 NP_006648.1 Accepted alive Link to Nucleotide Sequence:NM_006657.3Link to Protein Sequence:NP_006648.1Re-query CCDS DB by Nucleotide ID:NM_006657Re-query CCDS DB by Protein ID:NP_006648Link to BLAST:NP_006648.1
Original member Current member NCBI NM_206965.2 NP_996848.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_206965.2Link to Protein Sequence:NP_996848.1Re-query CCDS DB by Nucleotide ID:NM_206965Re-query CCDS DB by Protein ID:NP_996848Link to BLAST:NP_996848.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006648.1 541 O95954-1 541 100% 0 0
NP_996848.1 541 O95954-1 541 100% 0 0

Chromosomal Locations for CCDS 13731.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 46136987 46137073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46137239 46137334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46138508 46138646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46138880 46138923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46145417 46145578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46145818 46145947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46146266 46146327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46150119 46150250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46150388 46150525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46151558 46151737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46151892 46151980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46152907 46153035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46154149 46154332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46155470 46155523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1626 nt):
ATGTCCCAGCTGGTGGAATGCGTCCCCAACTTTTCGGAGGGGAAGAACCAGGAGGTGATCGACGCCATCT
CTGGAGCCATCACACAGACCCCGGGCTGCGTGCTGCTGGATGTGGACGCAGGCCCTTCCACCAACCGCAC
CGTGTACACCTTCGTGGGGCCGCCGGAGTGCGTGGTGGAGGGGGCCCTCAACGCTGCCCGGGTAGCTTCC
CGACTTATCGACATGAGCAGGCACCAAGGAGAGCACCCCCGCATGGGGGCCCTAGACGTCTGCCCCTTCA
TCCCCGTGAGGGGCGTCAGCGTGGATGAGTGTGTGCTCTGCGCCCAGGCCTTTGGCCAGAGGCTGGCAGA
GGAGCTGGACGTGCCAGTTTACCTGTACGGCGAGGCAGCCAGGATGGACAGTCGCCGGACCCTGCCGGCC
ATCCGGGCCGGGGAGTACGAGGCCCTCCCTAAGAAGCTCCAGCAGGCCGACTGGGCGCCCGACTTTGGTC
CCAGCTCCTTTGTCCCCAGTTGGGGGGCCACGGCCACGGGGGCGAGGAAGTTCCTCATTGCTTTTAACAT
CAACCTGCTCGGCACAAAGGAGCAAGCCCACCGCATCGCGCTCAACCTGCGGGAGCAGGGCCGCGGGAAG
GACCAGCCAGGACGTCTGAAGAAAGTTCAGGGCATTGGCTGGTACCTGGATGAGAAGAACCTGGCTCAGG
TGTCCACCAATCTTCTGGACTTTGAGGTCACGGCACTGCACACGGTCTACGAGGAGACCTGCCGAGAAGC
ACAGGAGCTGAGCCTCCCAGTGGTGGGCTCACAGCTGGTGGGCCTGGTGCCCCTGAAGGCTCTGCTGGAT
GCGGCCGCCTTCTACTGCGAGAAGGAGAACCTCTTCATCCTGGAGGAGGAGCAGCGGATCAGGCTGGTGG
TGAGCCGGCTGGGCCTGGACTCCCTGTGCCCCTTCAGCCCTAAGGAGCGGATCATCGAGTACCTGGTCCC
TGAGCGCGGGCCTGAGCGAGGCCTGGGCAGCAAGTCCCTGCGCGCCTTCGTGGGGGAGGTGGGTGCCCGC
TCTGCGGCCCCCGGGGGCGGCTCGGTGGCGGCGGCCGCTGCGGCCATGGGTGCGGCGCTGGGCTCCATGG
TGGGCCTCATGACCTACGGGCGGCGCCAATTCCAGTCCCTGGACACGACGATGCGGCGCCTGATCCCGCC
CTTCCGCGAGGCTTCGGCCAAGCTAACCACGCTGGTGGATGCCGACGCCGAGGCCTTCACCGCCTACCTG
GAAGCAATGAGGCTCCCCAAGAACACACCTGAGGAAAAGGACAGGCGCACGGCGGCCCTACAGGAGGGTC
TGAGGCGGGCAGTCTCTGTGCCGCTGACGCTGGCGGAGACGGTGGCCTCGCTGTGGCCGGCCCTGCAGGA
ACTGGCCCGGTGTGGGAACCTGGCCTGCCGGTCAGACCTCCAGGTGGCGGCCAAAGCCCTGGAGATGGGC
GTGTTTGGCGCATATTTCAACGTGCTCATCAACCTGAGGGACATCACAGACGAGGCATTTAAGGACCAGA
TCCACCATCGTGTTTCCAGCCTCCTGCAGGAAGCCAAGACCCAGGCTGCACTGGTGCTGGACTGCTTGGA
GACCCGGCAGGAGTGA

Translation (541 aa):
MSQLVECVPNFSEGKNQEVIDAISGAITQTPGCVLLDVDAGPSTNRTVYTFVGPPECVVEGALNAARVAS
RLIDMSRHQGEHPRMGALDVCPFIPVRGVSVDECVLCAQAFGQRLAEELDVPVYLYGEAARMDSRRTLPA
IRAGEYEALPKKLQQADWAPDFGPSSFVPSWGATATGARKFLIAFNINLLGTKEQAHRIALNLREQGRGK
DQPGRLKKVQGIGWYLDEKNLAQVSTNLLDFEVTALHTVYEETCREAQELSLPVVGSQLVGLVPLKALLD
AAAFYCEKENLFILEEEQRIRLVVSRLGLDSLCPFSPKERIIEYLVPERGPERGLGSKSLRAFVGEVGAR
SAAPGGGSVAAAAAAMGAALGSMVGLMTYGRRQFQSLDTTMRRLIPPFREASAKLTTLVDADAEAFTAYL
EAMRLPKNTPEEKDRRTAALQEGLRRAVSVPLTLAETVASLWPALQELARCGNLACRSDLQVAAKALEMG
VFGAYFNVLINLRDITDEAFKDQIHHRVSSLLQEAKTQAALVLDCLETRQE


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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