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Report for CCDS13999.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13999.1 Public Homo sapiens 22 GRAP2 24 110 108 CCDS HistoryNCBI Gene:9402Re-query CCDS DB by CCDS ID:13999.1Re-query CCDS DB by GeneID:9402See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13999.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000344138.9 ENSP00000339186.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000344138.9Link to Ensembl Protein Viewer:ENSP00000339186.4Re-query CCDS DB by Nucleotide ID:ENST00000344138Re-query CCDS DB by Protein ID:ENSP00000339186
Original member Current member EBI ENST00000407075.3 ENSP00000385607.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000407075.3Link to Ensembl Protein Viewer:ENSP00000385607.3Re-query CCDS DB by Nucleotide ID:ENST00000407075Re-query CCDS DB by Protein ID:ENSP00000385607
Original member Current member NCBI NM_001291824.2 NP_001278753.1 Accepted alive Link to Nucleotide Sequence:NM_001291824.2Link to Protein Sequence:NP_001278753.1Re-query CCDS DB by Nucleotide ID:NM_001291824Re-query CCDS DB by Protein ID:NP_001278753Link to BLAST:NP_001278753.1
Original member Current member NCBI NM_001291825.1 NP_001278754.1 Accepted alive Link to Nucleotide Sequence:NM_001291825.1Link to Protein Sequence:NP_001278754.1Re-query CCDS DB by Nucleotide ID:NM_001291825Re-query CCDS DB by Protein ID:NP_001278754Link to BLAST:NP_001278754.1
Original member Current member NCBI NM_004810.4 NP_004801.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004810.4Link to Protein Sequence:NP_004801.1Re-query CCDS DB by Nucleotide ID:NM_004810Re-query CCDS DB by Protein ID:NP_004801Link to BLAST:NP_004801.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001278753.1 330 O75791-1 330 100% 0 0
NP_001278754.1 330 O75791-1 330 100% 0 0
NP_004801.1 330 O75791-1 330 100% 0 0

Chromosomal Locations for CCDS 13999.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 39947107 39947184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 39955819 39955910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 39960055 39960174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 39965990 39966158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 39968042 39968272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 39969411 39969533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 39970905 39971084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (993 nt):
ATGGAAGCTGTTGCCAAGTTTGATTTCACTGCTTCAGGTGAGGATGAACTGAGCTTTCACACTGGAGATG
TTTTGAAGATTTTAAGTAACCAAGAGGAGTGGTTTAAGGCGGAGCTTGGGAGCCAGGAAGGATATGTGCC
CAAGAATTTCATAGACATCCAGTTTCCCAAATGGTTTCACGAAGGCCTCTCTCGACACCAGGCAGAGAAC
TTACTCATGGGCAAGGAGGTTGGCTTCTTCATCATCCGGGCCAGCCAGAGCTCCCCAGGGGACTTCTCCA
TCTCTGTCAGGCATGAGGATGACGTTCAACACTTCAAGGTCATGCGAGACAACAAGGGTAATTACTTTCT
GTGGACTGAGAAGTTTCCATCCCTAAATAAGCTGGTAGACTACTACAGGACAAATTCCATCTCCAGACAG
AAGCAGATCTTCCTTAGAGACAGAACCCGAGAAGACCAGGGTCACCGGGGCAACAGCCTGGACCGGAGGT
CCCAGGGAGGCCCACACCTCAGTGGGGCTGTGGGAGAAGAAATCCGACCTTCGATGAACCGGAAGCTGTC
GGATCACCCCCCGACCCTTCCCCTGCAGCAGCACCAGCACCAGCCACAGCCTCCGCAATATGCCCCAGCG
CCCCAGCAGCTGCAGCAGCCCCCACAGCAGCGATATCTGCAGCACCACCATTTCCACCAGGAACGCCGAG
GAGGCAGCCTTGACATAAATGATGGGCATTGTGGCACCGGCTTGGGCAGTGAAATGAATGCGGCCCTCAT
GCATCGGAGACACACAGACCCAGTGCAGCTCCAGGCGGCAGGGCGAGTGCGGTGGGCCCGGGCGCTGTAT
GACTTTGAGGCCCTGGAGGATGACGAGCTGGGGTTCCACAGCGGGGAGGTGGTGGAGGTCCTGGATAGCT
CCAACCCATCCTGGTGGACCGGCCGCCTGCACAACAAGCTGGGCCTCTTCCCTGCCAACTACGTGGCACC
CATGACCCGATAA

Translation (330 aa):
MEAVAKFDFTASGEDELSFHTGDVLKILSNQEEWFKAELGSQEGYVPKNFIDIQFPKWFHEGLSRHQAEN
LLMGKEVGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDNKGNYFLWTEKFPSLNKLVDYYRTNSISRQ
KQIFLRDRTREDQGHRGNSLDRRSQGGPHLSGAVGEEIRPSMNRKLSDHPPTLPLQQHQHQPQPPQYAPA
PQQLQQPPQQRYLQHHHFHQERRGGSLDINDGHCGTGLGSEMNAALMHRRHTDPVQLQAAGRVRWARALY
DFEALEDDELGFHSGEVVEVLDSSNPSWWTGRLHNKLGLFPANYVAPMTR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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