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Report for CCDS14446.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14446.1 Public Homo sapiens X TENT5D 24 110 108 CCDS HistoryNCBI Gene:169966Re-query CCDS DB by CCDS ID:14446.1Re-query CCDS DB by GeneID:169966See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14446.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000308293.6 ENSP00000308575.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000308293.6Link to Ensembl Protein Viewer:ENSP00000308575.5Re-query CCDS DB by Nucleotide ID:ENST00000308293Re-query CCDS DB by Protein ID:ENSP00000308575
Original member Current member EBI ENST00000538312.5 ENSP00000443410.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000538312.5Link to Ensembl Protein Viewer:ENSP00000443410.1Re-query CCDS DB by Nucleotide ID:ENST00000538312Re-query CCDS DB by Protein ID:ENSP00000443410
Original member Current member NCBI NM_001170574.2 NP_001164045.1 Accepted alive Link to Nucleotide Sequence:NM_001170574.2Link to Protein Sequence:NP_001164045.1Re-query CCDS DB by Nucleotide ID:NM_001170574Re-query CCDS DB by Protein ID:NP_001164045Link to BLAST:NP_001164045.1
Original member Current member NCBI NM_152630.5 NP_689843.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152630.5Link to Protein Sequence:NP_689843.1Re-query CCDS DB by Nucleotide ID:NM_152630Re-query CCDS DB by Protein ID:NP_689843Link to BLAST:NP_689843.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001164045.1 389 Q8NEK8 389 100% 0 0
NP_689843.1 389 Q8NEK8 389 100% 0 0

Chromosomal Locations for CCDS 14446.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 80442540 80443709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1170 nt):
ATGTCTGAAATCAGATTCACCAATCTCACTTGGGATCAAGTTATAACACTGGATCAAGTGTTAGATGAAG
TAATTCCAATTCATGGAAAGGGGAATTTCCCCACAATGGAGGTAAAACCAAAAGACATCATTCATGTTGT
GAAAGATCAACTCATAGGGCAAGGAATTATTGTTAAAGATGCCAGATTGAATGGTTCCGTAGCAAGTTAC
ATACTTGCAAGCCACAATGGAATCAGCTATAAGGATCTGGACGTTATTTTTGGTGTTGAGCTTCCAGGTA
ACGAAGAATTTCAGGTTGTTAAAGATGCAGTTCTAGACTGTCTACTTGACTTTTTACCAAAAGATGTAAA
GAAGGAAAAGCTCTCCCCAGATATCATGAAAGACGCTTACGTACAGAAATTGGTCAAGGTTTGCAATGGG
CATGATTGTTGGAGTCTTATCTCCCTTTCAAATAACACTGGGAAGAATTTAGAACTAAAATTTGTGAGTT
CACTCAGACGGCAGTTTGAATTTAGTGTAGATTCCTTTCAAATTGTTTTGGATCCCATGTTAGACTTCTA
CAGTGACAAAAATGCCAAGCTAACCAAAGAATCCTATCCTGTTGTGGTAGCTGAAAGCATGTATGGAGAC
TTCCAGGAAGCAATGACACATTTGCAACACAAGCTCATATGTACCAGGAAACCTGAAGAGATTAGAGGTG
GTGGCCTTCTGAAGTACTGCAGCTTGCTGGTTCATGGCTTCAAGCCAGCCTGTATGTCAGAAATCAAAAA
CCTAGAACGTTATATGTGCTCTAGATTCTTTATTGATTTTCCTCATATAGAAGAACAGCAAAAGAAAATT
GAATCATACCTCCACAACCATTTCATAGGTGAAGGAATGACCAAGTATGACTACCTTATGACCTTGCATG
GAGTTGTGAATGAAAGCACTGTTTGCCTCATGAGTTATGAAAGAAGACAGATTCTCCACCTGATCACCAT
GATGGCTTTGAAAGTACTTGGAGAACTAAATATTCTACCCAATACACAAAAGGTAACTTGCTTTTATCAG
CCTGCTCCGTACTTTGCAGCTGAGGCAAGGTACCCTATTTATGTAATACCTGAGCCACCCCCCGTTAGCT
TCCAGCCATACCACCCACTGCACTTTCGTGGATCAAATGGTATGAGTTAA

Translation (389 aa):
MSEIRFTNLTWDQVITLDQVLDEVIPIHGKGNFPTMEVKPKDIIHVVKDQLIGQGIIVKDARLNGSVASY
ILASHNGISYKDLDVIFGVELPGNEEFQVVKDAVLDCLLDFLPKDVKKEKLSPDIMKDAYVQKLVKVCNG
HDCWSLISLSNNTGKNLELKFVSSLRRQFEFSVDSFQIVLDPMLDFYSDKNAKLTKESYPVVVAESMYGD
FQEAMTHLQHKLICTRKPEEIRGGGLLKYCSLLVHGFKPACMSEIKNLERYMCSRFFIDFPHIEEQQKKI
ESYLHNHFIGEGMTKYDYLMTLHGVVNESTVCLMSYERRQILHLITMMALKVLGELNILPNTQKVTCFYQ
PAPYFAAEARYPIYVIPEPPPVSFQPYHPLHFRGSNGMS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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