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Report for CCDS14880.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14880.1 Public Mus musculus 1 Cnnm3 23 108 98 CCDS HistoryNCBI Gene:94218Re-query CCDS DB by CCDS ID:14880.1Re-query CCDS DB by GeneID:94218See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14880.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000001166.13 ENSMUSP00000001166.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000001166.13Link to Ensembl Protein Viewer:ENSMUSP00000001166.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000001166Re-query CCDS DB by Protein ID:ENSMUSP00000001166
Original member Current member NCBI NM_053186.3 NP_444416.2 Accepted alive Link to Nucleotide Sequence:NM_053186.3Link to Protein Sequence:NP_444416.2Re-query CCDS DB by Nucleotide ID:NM_053186Re-query CCDS DB by Protein ID:NP_444416Link to BLAST:NP_444416.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_444416.2 713 Q32NY4-1 713 100% 0 0

Chromosomal Locations for CCDS 14880.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 36511911 36513153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36518952 36519095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36520078 36520227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36520519 36520688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36520819 36520915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36521205 36521338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36521701 36521839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36525166 36525230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2142 nt):
ATGGCGGCGGCTGCTGCGGCTGTGGTGGGTTGGTTGGGCTGGGTGCTTGCCGCGTTCTGTCTGGGCAGCA
CCGCAGGGGAGGCGGCGCCGGCGCCGGGCGCGGGACTGCTGAACTTCTGCACGGAAGAGGACAGCGCACC
GGGCGCGGGCTCCCTGCGCGGAAGGGCAGCGCCAGAGGCCACTTTGTGCTTGCGACTCTTCTGCTCCGGC
TTGGCCAACAGCTCCTGGACCTGGGTAGCCGCCGAGGGCGCAGGCTGCCCGGAGGGCGGACGGGCCACGG
AGCCCGAGGAGGCGGCCGCCCCGACGGGCGAGTGGCGCGCGCTGCTGCGCCTGCGCGCCGAGGCCGGCCA
CCCGCGCTCCGCGCTGCTGGCGGTGCGCGTGGAGCCGGGTGGTGGGGCCGCGGAGGAGGCGGCGCCGCCC
TGGGCGCTGGGGCTGGGGGCGGCCGGGCTGCTGGCCCTGGCGGCGGTGGCGCGCGGCCTGCAGCTGAGCG
CGCTGGCGCTGGCGCCGGCCGAGGTGCAGGTGCTGCGCGAGAGCGGCTCGGAGGCGGAGCGCGCGGCGGC
GCGGCGCCTGGAACCCGCGCGGCGCTGGGCCGGCTGCGCCCTGGGCGCGCTGCTGCTTCTGGCCAGCCTG
GCGCAGGCGGCACTGGCCGTGCTGCTGTACGGGGCGGCGGGCCAGCGCGCCGTGCCCGCCGTGCTGGGTT
GCGCGGGGCTGGTGTTCCTGGTGGGTGAGGTGCTGCCGGCCGCCGTGAGCGGACGCTGGGCGCTGGCGCT
GGCGCCGCGCGCGTTGGGCCTCAGCCGCCTGGCGGTGCTGCTCACCTTGCCCGTGGCGCTGCCGGTCGGG
CAGCTGCTGGAGCTGGCAGCGCGGCCGGGGCGTCTGCGGGAGCGCGTGCTGGAGCTGGCGCGCGGCGGCG
GCGACCCCTACAGCGACCTCAGCAAGGGAGTGCTGCGCTCCCGGACCGTGGAGGACGTGCTCACGCCGCT
CGAAGACTGCTTTATGCTGGACTCCGGCACTGTCCTAGACTTCAGCGTCCTCGCCAGCATCATGCAGAGC
GGCCACACGCGCATCCCAGTGTACGAGGAGGAGCGCTCCAACATCGTGGACATGCTCTACCTCAAAGACT
TGGCTATCGTTGAGCCCGAGGACTGCACACCGCTCAGCACCATCACCCGCTTCTACAACCATCCACTCCA
CTTTGTCTTCAACGATACCAAACTGGACGCTGTCCTGGAGGAGTTCAAGCGAGGCAAGTCCCACCTGGCC
ATTGTGCAGAAGGTGAACAATGAGGGCGAGGGCGACCCCTTCTACGAGGTGCTGGGCCTGGTCACCCTGG
AGGACGTCATCGAGGAGATCATCAAGTCTGAGATCTTGGATGAGTCTGAAGACTACTCAGACACAAAGGT
GAGGAAGAAGACCGTCGCCCTGGGAGCTCCTCTCAAGCGAAAGGAGGAATTCTCCTTATTCAAGGTGTCT
GATGATGAATATAAAGTAAAAATCTCGCCTCAGCTGCTCCTGGCCACCCAGCGCTTCCTTTCCCGAGAGG
TGGATGTGTTCAGCCCATTGCGAGTCTCTGAGAAAGTCTTGCTGCACCTGCTGAAGCATCCCAGTGTCAA
CCAGGAGGTGACGTTTGACGAGAGCAACCGCCTGGCCGCACACCATTATCTGTACCAGCGCAGCCAGCCA
GTAGATTACTTCATTCTCATTCTGCAGGGCAGAGTCGAGGTCGAAATTGGGAAAGAGGGCCTGAAGTTCG
AGAACGGGGCCTTCACGTACTATGGAGTGTCCGCCCTGACAGCCCCATCCTCAGCTCACCAGTCCCCAGT
GTCTTCACGCCAGCTCATCCGCCATGACGTGCAGCCTGAACCAGCCGATGGTACCCGCTCCTGCACATAC
TGTCCTGACTACACTGTGAGGGCCCTTTCCGACCTGCAGCTCATTAAGGTCACACGGCTGCAGTACCTTA
ATGCACTCCTGGCTACCCGAGCCCAAAGCTTGCCTCCATCCCCAGAGAACGCTGAGCTCCAGGCTATCCC
AGGCAGCCAGACCAGGCTCCTTGGTGACAAGTCCAGAGAGACAGCAGGGTCCACCAACAGCAGACCCAGC
ATCCCAGTGGAGGAGAGCCCTGGGCGGAACCCAGGAGTGTAA

Translation (713 aa):
MAAAAAAVVGWLGWVLAAFCLGSTAGEAAPAPGAGLLNFCTEEDSAPGAGSLRGRAAPEATLCLRLFCSG
LANSSWTWVAAEGAGCPEGGRATEPEEAAAPTGEWRALLRLRAEAGHPRSALLAVRVEPGGGAAEEAAPP
WALGLGAAGLLALAAVARGLQLSALALAPAEVQVLRESGSEAERAAARRLEPARRWAGCALGALLLLASL
AQAALAVLLYGAAGQRAVPAVLGCAGLVFLVGEVLPAAVSGRWALALAPRALGLSRLAVLLTLPVALPVG
QLLELAARPGRLRERVLELARGGGDPYSDLSKGVLRSRTVEDVLTPLEDCFMLDSGTVLDFSVLASIMQS
GHTRIPVYEEERSNIVDMLYLKDLAIVEPEDCTPLSTITRFYNHPLHFVFNDTKLDAVLEEFKRGKSHLA
IVQKVNNEGEGDPFYEVLGLVTLEDVIEEIIKSEILDESEDYSDTKVRKKTVALGAPLKRKEEFSLFKVS
DDEYKVKISPQLLLATQRFLSREVDVFSPLRVSEKVLLHLLKHPSVNQEVTFDESNRLAAHHYLYQRSQP
VDYFILILQGRVEVEIGKEGLKFENGAFTYYGVSALTAPSSAHQSPVSSRQLIRHDVQPEPADGTRSCTY
CPDYTVRALSDLQLIKVTRLQYLNALLATRAQSLPPSPENAELQAIPGSQTRLLGDKSRETAGSTNSRPS
IPVEESPGRNPGV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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