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Report for CCDS15169.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15169.1 Public Mus musculus 1 Or6b2b 23 108 98 CCDS HistoryNCBI Gene:258228Re-query CCDS DB by CCDS ID:15169.1Re-query CCDS DB by GeneID:258228See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15169.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000071521.2 ENSMUSP00000084047.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000071521.2Link to Ensembl Protein Viewer:ENSMUSP00000084047.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000071521Re-query CCDS DB by Protein ID:ENSMUSP00000084047
Original member Current member EBI ENSMUST00000204009.2 ENSMUSP00000145446.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000204009.2Link to Ensembl Protein Viewer:ENSMUSP00000145446.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000204009Re-query CCDS DB by Protein ID:ENSMUSP00000145446
Original member Current member NCBI NM_001011525.1 NP_001011525.1 Accepted alive Link to Nucleotide Sequence:NM_001011525.1Link to Protein Sequence:NP_001011525.1Re-query CCDS DB by Nucleotide ID:NM_001011525Re-query CCDS DB by Protein ID:NP_001011525Link to BLAST:NP_001011525.1

Chromosomal Locations for CCDS 15169.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 92490818 92491753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (936 nt):
ATGAGGGGGGAGAACATCACCAAGGTCAGCACCTTCATCCTGCTGGGCTTCCCCACAGCCCCTGAGCTGC
AATACCTGCTCTTCCTCCTCTTCCTGCTCGCCTACCTCTTTGTGCTGGTGGAGAACCTGACCATCATCCT
CACTGTCTGGAGCAGCGCCTCCCTGCACAGACCCATGTACTACTTCCTGGGTTCCTTGTCTTTCCTAGAG
ATCTGGTATGTGTCAGACATCATCCCCAAAATGCTGGATGGCTTCCTCTTGCAGAGGAAACGCATCTCTT
TCACTGGCTGCATGACTCAGCTCTATTTTTTCATCTCCCTGGTGTGTACAGAGTGTGTACTCTTGGCTTC
CATGGCCTATGACCGCTATGTGGCCATCTGCCACCCCCTGCGCTACCAAGTCATCATGACCACAGGGCTA
TGTGTCCAGCTTGTGGCCTTCTCTTTTGCAAGTGCCTTCACAGTCTCTGTGATTAAGGTCTACTTTATCT
CCAGTGCCACCTTCTGTGGTTCCAATGTCTTGAACCACTTCTTCTGTGACATCTCCCCCATCCTCAAGCT
GGCCTGCACTGACTTCTCTACTGCAGAGCTGGTGGACTTCATCCTGGCCTTCATCATTCTGGTGTTCCCA
CTCTTGGCCACCATTCTTTCCTATGGCTACATCACCCTGGCTGTGCTGCGCATCCCTTCAGCCACAGGCC
GGTGGAGAGCCTTCTCCACCTGTGCCTCCCACCTCACTGTGGTCACCTTCTTCTATGTGGCCATGCTTTT
TATATATGTGAGACCCCAGGCCATTGATACCCGGAGCTCCAACAAGCTCATCTCTGCTGTGTACACTGTC
CTCACGCCCATCTTAAACCCCTTGATTTATTGCCTAAGGAACAAAGAGTTTAAGGATGCTGTGAAAAGGA
CCCTGGGTTTGGGTCACACTCTATAG

Translation (311 aa):
MRGENITKVSTFILLGFPTAPELQYLLFLLFLLAYLFVLVENLTIILTVWSSASLHRPMYYFLGSLSFLE
IWYVSDIIPKMLDGFLLQRKRISFTGCMTQLYFFISLVCTECVLLASMAYDRYVAICHPLRYQVIMTTGL
CVQLVAFSFASAFTVSVIKVYFISSATFCGSNVLNHFFCDISPILKLACTDFSTAELVDFILAFIILVFP
LLATILSYGYITLAVLRIPSATGRWRAFSTCASHLTVVTFFYVAMLFIYVRPQAIDTRSSNKLISAVYTV
LTPILNPLIYCLRNKEFKDAVKRTLGLGHTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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