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Report for CCDS15178.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15178.2 Public Mus musculus 1 Ankmy1 23 108 98 CCDS HistoryNCBI Gene:241158Re-query CCDS DB by CCDS ID:15178.2Re-query CCDS DB by GeneID:241158See the combined annotation on chromosome 1 in Sequence Viewer

Public Note for CCDS 15178.1
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and protein data.

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 15178.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112998.1 ENSMUSP00000108622.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112998.1Link to Ensembl Protein Viewer:ENSMUSP00000108622.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000112998Re-query CCDS DB by Protein ID:ENSMUSP00000108622
Original member Current member NCBI NM_172850.3 NP_766438.2 Accepted alive Link to Nucleotide Sequence:NM_172850.3Link to Protein Sequence:NP_766438.2Re-query CCDS DB by Nucleotide ID:NM_172850Re-query CCDS DB by Protein ID:NP_766438Link to BLAST:NP_766438.2

Chromosomal Locations for CCDS 15178.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 92870272 92870318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92870809 92870969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92871673 92871745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92876535 92876700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92877011 92877124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92878331 92878462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92879315 92879422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92880980 92881120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92881751 92881891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92883742 92883913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92884835 92885265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92886136 92886294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92886623 92886839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92888447 92888916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92896069 92896212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92899499 92899688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92902444 92902583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3006 nt):
ATGGAAGAAATTCGTTCCGTTGTTACCACGGACTCTCAAGGCTCGAAAACTTTAAGCTCCAGAGGTCTGG
AGGGGCAAAATGGTCGGTCTCTTGACACTGAGAGCCAGGATTCCGTGAAGAGCTACACCTTCTTCAGAAG
GAGCCGTCCAGGGGATCTCGGAGAGGATGAGGAGGAGTCTGAAGGCACCGTGGGCGAGCAGGACCTGAAG
GGGACTTACAAGCAGCTTGTCCAAGGGGTTCAGGAGTGGCAGGATGGCTGTGTTTACAAAGGGGAGTTCG
GGCTCAACATGAAGCTTGGATACGGCGAGTTCTCTTGGCCCACAGGCGAGGCCTACCATGGGCAGTTTTA
CCGGGACCATTTCCATGGCCTGGGCACCTACACGTGGCCGGATGGCTCCAGCTTCACAGGCACGTTTTAT
CTCAGCCAACGAGAAGGCTACGGGACCATGCACACAAAAACAATGTTATTCCAGGGATTGTACAAAGAGG
ACCAGAGATTTGGGCCGGGCATCGAGACCTACCCTGATGGCAGTCAGGATGTTGGCCTGTGGTTCCGTGA
GTACCTCCTCAAGCTGTGCACCAGGGTTCCCAGCGGTTTCTCCTTGGTAAACTACCCCGAATTCTTGGCC
TTCCTCACAAAATCGAGAAGGAGACTTGATCTCTCAGATGAGAAGGTGGAGTTGGGTCTTTCTGAGGAGC
AGGACCCCTTCTTCTATGACTATAAACAGTATCTCCTGAATGATGAACTAAAGCTGCCTCCAGAGATGCA
CGTCTATTCGACCGACAACAGTCACCTGCCCATGACCGACTCCCTGCGCCAAGAGCTAGATGACCACATC
TTCATGAATGAGATCCCTCCGTTCATTGAGGACGAAGAACCCTGGCTCATAACAAACGAGACTCCTTTGT
TGGTCAAAATCCAGAAGCAAACTTACAAGTTCAGGAACAAGGATGCTCATACCAGCTGGAACATACCTGC
CATCCTGGAGGGGAACCGCAGCAGGTTTGGGCCCAGCGGCCCCAAGGAGCAGATTTCCAAGAAGATGATC
ATGAAGGCTGAGGAAGGGGACTATAACTGGATTTTTGGAATCTTGAGGGACAACCTTGCCTGTGCTGACG
TGGCTGACTCCAAGGGTTACACTGTGCTGGCCGCTGCGGCAATGCATTCTCACCTGGACATTGTGAACCT
TCTCCTGGATTTCGGCGCTGACGTGAACAAGCGCTCGGACGAGGGCATCACGCCCCTCAGTATGTGCTTC
CTCCAGTATTATCCCTGCAAATCCTTCCACCCCAACATTGCTGAGAGGACCCTGCTTCAGGAATCTCCTA
AATCCTTGGTCACCCCCAAAATTTCATTCTTGCTTGCGGATGCAAACATAGATTATCTCTACGATGTGGG
CATGCCCATAGCAGGTGGAGATGAATTGAAGACAAGCAGCCTGGATGACTCCCTGGCCTCCATGCAAACC
CCGGAGTCCAGCAACATGCTTCACAAGGAAGAAGTCTCCCCAGTGAAGACTGTCAGCACTGACGTAGAGA
AAGAGTCTGAGGGAGCGGCAGAAAATGTGGACGCTAGCACCTTGTACAGCGTCGATACAAATTTCGAGTC
TACCAAGTGCCTGCGGAACTACACTATTAATGTCTCGAGGGACATCATGGAGAAGAGTGCCCAGGCCTAC
AGTTCATTGCCACAGCACCCCTGCTTCCCATACAAAGGGACCGTGAGGAAAATGGCACAGTCCATGGTCG
AACGCAGAAACCGTTGGATGACCATCACATTGCTGCTCCGCAGAGGTGCCGATCCTAACCTGTGTCAAGT
GCCCATGCAGGCTCTGTTTCTCGCCGTGAAGGCTGGGGATGTGGAAGGGGTGAGGCTGCTACTGATGAGT
GGGGCCCAGACGGACATTCAGTTTCCTCCACAGTTGCAGTCCCTGACCCCGCTCCACATCGCAGTCTCCC
TTCCCGGGGAGGAGGGCGTGAAGATCACTGAGCTGCTGCTCCACGTGATCACTAACGTGGACGCCAAGGC
AGCGGACGAGGACTACGTGTACAAAGGTGGCAAGGCTGATCTCCTGCCCTCAAGCCTGAAGCTCAACAAT
GAGCCGGGCCCACCCAAGAGCTTCTACTCCACACACACATTCATCCCAGAGGAGGGAGGGCGCACAGCTC
TGCATGTGGCCTGTGAGAGAGAGGACAACAAGAAGTGTGCCAGGGACATCGTGCGGCTCCTTCTGTCCCA
CAGAGCGAATCCAAACGTGCTGTGGAGCGGCCACTCCCCGCTCTCGCTGGCCATTGCCAGTGGGAATGAC
CTGGTTGTGAAGGAGCTCCTGTCCCAGGGAGCTGACCCCAACTTGCCTCTGACCAAAGGCTTGGGCACTG
CCCTGTGTGTTGTGTGTGACCTGGTCTATGAGCAACAGAGGAGCGTCGAGAACAAGATTGCCCTGATTGA
CCGGCTCATTAGCTACGGGGCGGATGTCCTGAACCCCGTGACTCTTGTGCAAGGCGATAGGACGGCTGTG
GGCACGGCAGTCGACTATGGCTACTTCAAGTTCTTCCAGGACCGGAAGATCGCCCACTGTCCCTTTCACG
CTCTGATGCCAGCAGAGCGGGAGGTATTCATGGCCCGGAAAAGGCTGCTGGAGTACTTAGGCTTGCAATT
GCGCCTTGCTGTCCTCAGCAAGGAAAGCCGGCTGGACACGAAGGCCCTGTACCTGAGCAAGAGAGAGCTG
GCTCCCTGTCACAGGCTGAAGAAAAAAGGTTCCAGCTCGGTTAGGACCCAATCCTCGGAGAAGCAGTCAA
TTCCCTTTTACAAGTTTTGCTACCAGTGTGGCCGCTCCATCGGGGTCCGCCTCTCACCCTGCCCCCGCTG
CTATGGAATCCTGACTTGTAGCAAGTACTGCAAGACCAAGGCCTGGATTGAGTTCCACAAGAAGGACTGC
AACGACATCATGGCCATGATTCCTCACTTGGAAGGTTCGGCTTGGAGGGTGGCAGAATCTCCATGA

Translation (1001 aa):
MEEIRSVVTTDSQGSKTLSSRGLEGQNGRSLDTESQDSVKSYTFFRRSRPGDLGEDEEESEGTVGEQDLK
GTYKQLVQGVQEWQDGCVYKGEFGLNMKLGYGEFSWPTGEAYHGQFYRDHFHGLGTYTWPDGSSFTGTFY
LSQREGYGTMHTKTMLFQGLYKEDQRFGPGIETYPDGSQDVGLWFREYLLKLCTRVPSGFSLVNYPEFLA
FLTKSRRRLDLSDEKVELGLSEEQDPFFYDYKQYLLNDELKLPPEMHVYSTDNSHLPMTDSLRQELDDHI
FMNEIPPFIEDEEPWLITNETPLLVKIQKQTYKFRNKDAHTSWNIPAILEGNRSRFGPSGPKEQISKKMI
MKAEEGDYNWIFGILRDNLACADVADSKGYTVLAAAAMHSHLDIVNLLLDFGADVNKRSDEGITPLSMCF
LQYYPCKSFHPNIAERTLLQESPKSLVTPKISFLLADANIDYLYDVGMPIAGGDELKTSSLDDSLASMQT
PESSNMLHKEEVSPVKTVSTDVEKESEGAAENVDASTLYSVDTNFESTKCLRNYTINVSRDIMEKSAQAY
SSLPQHPCFPYKGTVRKMAQSMVERRNRWMTITLLLRRGADPNLCQVPMQALFLAVKAGDVEGVRLLLMS
GAQTDIQFPPQLQSLTPLHIAVSLPGEEGVKITELLLHVITNVDAKAADEDYVYKGGKADLLPSSLKLNN
EPGPPKSFYSTHTFIPEEGGRTALHVACEREDNKKCARDIVRLLLSHRANPNVLWSGHSPLSLAIASGND
LVVKELLSQGADPNLPLTKGLGTALCVVCDLVYEQQRSVENKIALIDRLISYGADVLNPVTLVQGDRTAV
GTAVDYGYFKFFQDRKIAHCPFHALMPAEREVFMARKRLLEYLGLQLRLAVLSKESRLDTKALYLSKREL
APCHRLKKKGSSSVRTQSSEKQSIPFYKFCYQCGRSIGVRLSPCPRCYGILTCSKYCKTKAWIEFHKKDC
NDIMAMIPHLEGSAWRVAESP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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