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Report for CCDS15216.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15216.1 Public Mus musculus 1 Serpinb3b 23 108 98 CCDS HistoryNCBI Gene:383548Re-query CCDS DB by CCDS ID:15216.1Re-query CCDS DB by GeneID:383548See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 15216.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000086694.10 ENSMUSP00000083901.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000086694.10Link to Ensembl Protein Viewer:ENSMUSP00000083901.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000086694Re-query CCDS DB by Protein ID:ENSMUSP00000083901
Original member Current member EBI ENSMUST00000166100.1 ENSMUSP00000132370.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000166100.1Link to Ensembl Protein Viewer:ENSMUSP00000132370.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000166100Re-query CCDS DB by Protein ID:ENSMUSP00000132370
Original member Current member NCBI NM_198680.2 NP_941373.1 Accepted alive Link to Nucleotide Sequence:NM_198680.2Link to Protein Sequence:NP_941373.1Re-query CCDS DB by Nucleotide ID:NM_198680Re-query CCDS DB by Protein ID:NP_941373Link to BLAST:NP_941373.1

Chromosomal Locations for CCDS 15216.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 107154369 107154773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 107155412 107155567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 107155845 107155987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 107156830 107156947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 107157668 107157790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 107159021 107159077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 107159616 107159777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1164 nt):
ATGATTCGTTTTCATGCAGCTGATGTTAAATTCGCAGTTGAAATGTACAGGCAGCTCAGAGAATCAGACA
AGAACATTTTCTATTCCCCGATCAGCATGATGACAGCATTAGCAATGCTCCAGCTTGGAGCCAAAGGAAA
CACTGAAATACAAATTGAGAAGGTTCTTCAATTCATTGAAACCACCAAGAAGACAACAGAAAAATCTGAA
CACTGCGATGATGAAGAAAATGTCCATGAACAATTTCAAAAGCTTATAACTCAGTTAAACAAATCCAATG
ATGATTATGACCTGAAGGCTGCCAACAGTATCTATGGAGCAAAGGGTTTCCCATTTCTCCAGACATTTTT
GGAAGACATTAAGGAATATTATCAAGCTAAGGTGGAATCACTGGATTTCGAACATGCAACAGAAGAGAGC
GAAAAGAAGATTAATTCCTGGGTGGAAAGCAAAACAAATGGAAAAATCAAAGACTTATTTCCTAGTGGGA
GCCTAAGCAGTAGCACTATACTGGTTCTGGTGAATGCAGTGTATTTCAAAGGGCAATGGAATCGCAAATT
TAATGAAAACCATACAAGAGAAGAAAAGTTTTGGCTGAACAAGAACACAAGTAAACCTGTCCAGATGATG
AAACAACGAAACAAATTTAACTTCAGCTTTCTGGGGGATGTGCACGCCCAGATTGTGGAAATACCATACA
AAGGCAAAGATCTAAGTATGTTTGTCCTGCTGCCAATGGAAATTGATGGTCTGAAGCAGCTTGAAGAACA
ACTCACTACTGACAAATTACTAGAGTGGATAAAAGCAGAAAACATGCATTTGACTGAGTTGTATTTATCT
TTGCCTCGGTTCAAAGTGGAAGAGAAGTATGACCTCCAAGTTCCATTGGAACACATGGGGATGGTCGACG
CCTTTGATCCACAGAAGGCTGACTTCTCTGGCATGAGCAGCATTCCAGGTCTTGTGGTGTCTAAAGTTTT
ACACAAGTCCTTTGTGGAGGTGAATGAAGAGGGAACAGAAGCTGCTGCTGCCACAGGAGTGGAAGTCAGT
GTAAGATCAGCACAGATAGCAGAAGATTTCTGTTGTGATCATCCATTCCTATTCTTCATCATTCACAGAA
TGACCAACAGCATCCTCTTCTTTGGCAGAATCTGCTCCCCTTAA

Translation (387 aa):
MIRFHAADVKFAVEMYRQLRESDKNIFYSPISMMTALAMLQLGAKGNTEIQIEKVLQFIETTKKTTEKSE
HCDDEENVHEQFQKLITQLNKSNDDYDLKAANSIYGAKGFPFLQTFLEDIKEYYQAKVESLDFEHATEES
EKKINSWVESKTNGKIKDLFPSGSLSSSTILVLVNAVYFKGQWNRKFNENHTREEKFWLNKNTSKPVQMM
KQRNKFNFSFLGDVHAQIVEIPYKGKDLSMFVLLPMEIDGLKQLEEQLTTDKLLEWIKAENMHLTELYLS
LPRFKVEEKYDLQVPLEHMGMVDAFDPQKADFSGMSSIPGLVVSKVLHKSFVEVNEEGTEAAAATGVEVS
VRSAQIAEDFCCDHPFLFFIIHRMTNSILFFGRICSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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