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Report for CCDS1557.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1557.1 Public Homo sapiens 1 COQ8A 24 110 108 CCDS HistoryNCBI Gene:56997Re-query CCDS DB by CCDS ID:1557.1Re-query CCDS DB by GeneID:56997See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1557.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000366777.4 ENSP00000355739.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000366777.4Link to Ensembl Protein Viewer:ENSP00000355739.3Re-query CCDS DB by Nucleotide ID:ENST00000366777Re-query CCDS DB by Protein ID:ENSP00000355739
Original member Current member NCBI NM_020247.5 NP_064632.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020247.5Link to Protein Sequence:NP_064632.2Re-query CCDS DB by Nucleotide ID:NM_020247Re-query CCDS DB by Protein ID:NP_064632Link to BLAST:NP_064632.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064632.2 647 Q8NI60-1 647 100% 0 0

Chromosomal Locations for CCDS 1557.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 226961386 226961562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 226965000 226965410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 226965671 226965737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 226977449 226977523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 226982027 226982149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 226982678 226982763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 226982894 226983034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 226983552 226983633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 226983761 226983854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 226984094 226984235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 226984548 226984655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 226984876 226984941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 226985254 226985340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 226986453 226986737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1944 nt):
ATGGCTGCCATATTGGGAGACACCATCATGGTGGCTAAAGGCCTTGTCAAGCTGACCCAGGCGGCCGTGG
AAACCCACCTGCAGCACTTGGGCATCGGAGGGGAGCTGATCATGGCGGCCAGGGCCCTGCAGTCCACGGC
TGTGGAGCAGATTGGCATGTTCTTGGGGAAGGTGCAGGGTCAGGATAAACATGAAGAATATTTTGCTGAG
AACTTCGGCGGCCCAGAAGGGGAGTTCCACTTCTCAGTCCCGCATGCAGCCGGAGCCTCCACAGACTTCT
CTTCAGCCTCCGCTCCCGACCAGTCAGCGCCCCCATCCCTGGGTCATGCCCACAGCGAGGGCCCAGCTCC
TGCCTACGTGGCCAGTGGACCCTTTAGAGAAGCCGGGTTCCCCGGCCAGGCCTCCTCCCCTCTGGGCAGG
GCCAACGGGAGGCTCTTTGCAAACCCCAGAGACTCATTCTCTGCCATGGGCTTTCAGCGAAGGTTCTTCC
ACCAGGACCAATCCCCTGTTGGGGGCCTCACAGCCGAGGACATTGAGAAGGCCCGGCAGGCTAAGGCTCG
CCCCGAGAACAAGCAGCACAAACAGACGCTCAGCGAGCATGCCCGGGAGCGGAAGGTGCCTGTGACGAGG
ATTGGCCGGCTGGCCAACTTCGGAGGTCTGGCCGTGGGCCTGGGCTTCGGGGCACTGGCAGAGGTCGCCA
AGAAGAGCCTGCGCTCCGAGGACCCCTCAGGGAAGAAGGCCGTGCTGGGTTCCAGTCCTTTCCTGTCCGA
GGCCAATGCAGAGCGGATCGTGCGCACGCTCTGCAAGGTGCGTGGTGCGGCACTCAAGCTGGGCCAGATG
CTGAGCATCCAGGATGATGCCTTTATCAACCCCCACCTGGCTAAGATCTTCGAGCGGGTGCGGCAGAGCG
CGGACTTCATGCCACTGAAGCAGATGATGAAAACTCTCAACAACGACCTGGGCCCCAACTGGCGGGACAA
GTTGGAATACTTCGAGGAGCGGCCCTTCGCCGCCGCATCCATTGGGCAGGTGCACTTGGCCCGAATGAAG
GGCGGCCGCGAGGTGGCCATGAAGATCCAGTACCCTGGCGTGGCCCAGAGCATCAACAGTGATGTCAACA
ACCTCATGGCCGTGTTGAACATGAGCAACATGCTTCCAGAAGGCCTGTTCCCCGAGCACCTGATCGACGT
GCTGAGGCGGGAGCTGGCCCTGGAGTGTGACTACCAGCGAGAGGCCGCCTGTGCCCGCAAGTTCAGGGAC
CTGCTGAAGGGCCACCCCTTCTTCTATGTGCCTGAGATTGTGGATGAGCTCTGCAGCCCACATGTGCTGA
CCACAGAGCTGGTGTCTGGCTTCCCCCTGGACCAGGCCGAAGGGCTCAGCCAGGAGATTCGGAACGAGAT
CTGCTACAACATCCTGGTTCTGTGCCTGAGGGAGCTGTTCGAGTTCCACTTCATGCAAACAGACCCCAAC
TGGTCCAACTTCTTCTATGACCCCCAGCAGCACAAGGTGGCTCTTTTGGATTTTGGGGCAACGCGGGAAT
ATGACAGATCCTTCACCGACCTCTACATTCAGATCATCAGGGCTGCTGCCGACAGGGACAGGGAGACTGT
GCGGGCGAAATCCATAGAGATGAAGTTCCTCACCGGCTACGAGGTCAAGGTCATGGAAGACGCCCACTTG
GATGCCATCCTCATCCTGGGGGAGGCCTTCGCCTCTGATGAGCCTTTTGATTTTGGCACTCAGAGCACCA
CCGAGAAGATCCACAACCTGATTCCCGTCATGCTGAGGCACCGTCTCGTCCCCCCACCCGAGGAAACCTA
CTCCCTGCACAGGAAGATGGGGGGCTCCTTCCTCATCTGCTCCAAGCTGAAGGCCCGCTTCCCCTGCAAG
GCCATGTTCGAGGAGGCCTACAGCAACTACTGCAAGAGGCAGGCCCAGCAGTAG

Translation (647 aa):
MAAILGDTIMVAKGLVKLTQAAVETHLQHLGIGGELIMAARALQSTAVEQIGMFLGKVQGQDKHEEYFAE
NFGGPEGEFHFSVPHAAGASTDFSSASAPDQSAPPSLGHAHSEGPAPAYVASGPFREAGFPGQASSPLGR
ANGRLFANPRDSFSAMGFQRRFFHQDQSPVGGLTAEDIEKARQAKARPENKQHKQTLSEHARERKVPVTR
IGRLANFGGLAVGLGFGALAEVAKKSLRSEDPSGKKAVLGSSPFLSEANAERIVRTLCKVRGAALKLGQM
LSIQDDAFINPHLAKIFERVRQSADFMPLKQMMKTLNNDLGPNWRDKLEYFEERPFAAASIGQVHLARMK
GGREVAMKIQYPGVAQSINSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRRELALECDYQREAACARKFRD
LLKGHPFFYVPEIVDELCSPHVLTTELVSGFPLDQAEGLSQEIRNEICYNILVLCLRELFEFHFMQTDPN
WSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQIIRAAADRDRETVRAKSIEMKFLTGYEVKVMEDAHL
DAILILGEAFASDEPFDFGTQSTTEKIHNLIPVMLRHRLVPPPEETYSLHRKMGGSFLICSKLKARFPCK
AMFEEAYSNYCKRQAQQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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