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Report for CCDS15667.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15667.1 Public Mus musculus 2 Nudt5 23 108 98 CCDS HistoryNCBI Gene:53893Re-query CCDS DB by CCDS ID:15667.1Re-query CCDS DB by GeneID:53893See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15667.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026927.9 ENSMUSP00000026927.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026927.9Link to Ensembl Protein Viewer:ENSMUSP00000026927.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000026927Re-query CCDS DB by Protein ID:ENSMUSP00000026927
Original member NCBI NM_016918.3 NP_058614.1 Updated not alive Link to Nucleotide Sequence:NM_016918.3Link to Protein Sequence:NP_058614.1Re-query CCDS DB by Nucleotide ID:NM_016918Re-query CCDS DB by Protein ID:NP_058614
Current member NCBI NM_016918.4 NP_058614.1 Accepted alive Link to Nucleotide Sequence:NM_016918.4Link to Protein Sequence:NP_058614.1Re-query CCDS DB by Nucleotide ID:NM_016918Re-query CCDS DB by Protein ID:NP_058614Link to BLAST:NP_058614.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_058614.1 218 Q9JKX6 218 100% 0 0

Chromosomal Locations for CCDS 15667.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 5854859 5854918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 5855980 5856047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 5861027 5861076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 5862301 5862408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 5863579 5863674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 5864347 5864448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 5866233 5866241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 5866354 5866407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 5868089 5868198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (657 nt):
ATGGAGACCCGAGAATCCACAGAGTCTTCTCCAGGCAAGCACCTTGTTACCTCAGAGGAGTTGATCTCAG
AAGGAAAATGGGTCAAATTTGAAAAAACAACTTATATGGATCCCACTGGTAAAACCAGAACTTGGGAAAC
AGTGAAACTTACAACCAGGAAGGGAAAATCTGCTGATGCCGTGTCGGTCATACCTGTGCTGCAAAGAACC
CTGCACCATGAGTGCGTCATCCTGGTGAAGCAGTTCCGGCCCCCGATGGGCAGCTACTGCCTGGAGTTTC
CAGCAGGGTTCATCGAAGACGGAGAAAGCCCAGAGGCGGCTGCTCTTCGGGAGCTGGAGGAAGAAACTGG
CTACAAAGGTGAAGTTGCGGAATGCTCTCCAGCTGTGTGCATGGATCCAGGCTTGTCAAACTGCACCACA
CATGTTGTGACAGTGACCATCAATGGAGATGATGCAGGAAATGTAAGGCCAAAACCCAAACCAGGGGATG
GAGAATTTATGGAAGTGATTTCTTTACCAAAGAATGATCTGCTGACAAGACTTGACGCTTTGGGAGCAGA
ACAACACCTTACAGTGGATGCCAAGGTCTACGCCTACGGTCTGGCTCTGAAACACGCCAACTCGAAGCCA
TTCGAAGTGCCCTTCCTCAAATTTTAA

Translation (218 aa):
METRESTESSPGKHLVTSEELISEGKWVKFEKTTYMDPTGKTRTWETVKLTTRKGKSADAVSVIPVLQRT
LHHECVILVKQFRPPMGSYCLEFPAGFIEDGESPEAAALRELEEETGYKGEVAECSPAVCMDPGLSNCTT
HVVTVTINGDDAGNVRPKPKPGDGEFMEVISLPKNDLLTRLDALGAEQHLTVDAKVYAYGLALKHANSKP
FEVPFLKF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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