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Report for CCDS15685.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15685.1 Public Mus musculus 2 Il2ra 23 108 98 CCDS HistoryNCBI Gene:16184Re-query CCDS DB by CCDS ID:15685.1Re-query CCDS DB by GeneID:16184See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15685.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028111.5 ENSMUSP00000028111.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028111.5Link to Ensembl Protein Viewer:ENSMUSP00000028111.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000028111Re-query CCDS DB by Protein ID:ENSMUSP00000028111
Original member Current member NCBI NM_008367.3 NP_032393.3 Accepted alive Link to Nucleotide Sequence:NM_008367.3Link to Protein Sequence:NP_032393.3Re-query CCDS DB by Nucleotide ID:NM_008367Re-query CCDS DB by Protein ID:NP_032393Link to BLAST:NP_032393.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032393.3 268 P01590 268 100% 0 0

Chromosomal Locations for CCDS 15685.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 11643001 11643064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 11674295 11674471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 11676827 11676940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 11680210 11680425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 11681931 11682002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 11683054 11683125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 11684377 11684443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 11689758 11689782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (807 nt):
ATGGAGCCACGCTTGCTGATGTTGGGGTTTCTCTCATTAACCATAGTACCCAGTTGTCGGGCAGAACTGT
GTCTGTATGACCCACCCGAGGTCCCCAATGCCACATTCAAAGCCCTCTCCTACAAGAACGGCACCATCCT
AAACTGTGAATGCAAGAGAGGTTTCCGAAGACTAAAGGAATTGGTCTATATGCGTTGCTTAGGAAACTCC
TGGAGCAGCAACTGCCAGTGCACCAGCAACTCCCATGACAAATCGAGAAAGCAAGTTACAGCTCAACTTG
AACACCAGAAAGAGCAACAAACCACAACAGACATGCAGAAGCCAACACAGTCTATGCACCAAGAGAACCT
TACAGGTCACTGCAGGGAGCCACCTCCTTGGAAACATGAAGATTCCAAGAGAATCTATCATTTCGTGGAA
GGACAGAGTGTTCACTACGAGTGTATTCCGGGATACAAGGCTCTACAGAGAGGTCCTGCTATTAGCATCT
GCAAGATGAAGTGTGGGAAAACGGGGTGGACTCAGCCCCAGCTCACATGTGTAGATGAAAGAGAACACCA
CCGATTTCTGGCTAGTGAGGAATCTCAAGGAAGCAGAAATTCTTCTCCCGAGAGTGAGACTTCCTGCCCC
ATAACCACCACAGACTTCCCACAACCCACAGAAACAACTGCAATGACGGAGACATTTGTGCTCACAATGG
AGTATAAGGTAGCAGTGGCCAGCTGCCTCTTCCTGCTCATCAGCATCCTCCTCCTGAGCGGGCTCACCTG
GCAACACAGATGGAGGAAGAGCAGAAGAACCATCTAG

Translation (268 aa):
MEPRLLMLGFLSLTIVPSCRAELCLYDPPEVPNATFKALSYKNGTILNCECKRGFRRLKELVYMRCLGNS
WSSNCQCTSNSHDKSRKQVTAQLEHQKEQQTTTDMQKPTQSMHQENLTGHCREPPPWKHEDSKRIYHFVE
GQSVHYECIPGYKALQRGPAISICKMKCGKTGWTQPQLTCVDEREHHRFLASEESQGSRNSSPESETSCP
ITTTDFPQPTETTAMTETFVLTMEYKVAVASCLFLLISILLLSGLTWQHRWRKSRRTI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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