NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS15772.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15772.1 Public Mus musculus 2 Fut7 23 108 98 CCDS HistoryNCBI Gene:14347Re-query CCDS DB by CCDS ID:15772.1Re-query CCDS DB by GeneID:14347See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15772.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000041654.5 ENSMUSP00000039985.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000041654.5Link to Ensembl Protein Viewer:ENSMUSP00000039985.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000041654Re-query CCDS DB by Protein ID:ENSMUSP00000039985
Original member Current member EBI ENSMUST00000114278.8 ENSMUSP00000109917.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000114278.8Link to Ensembl Protein Viewer:ENSMUSP00000109917.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000114278Re-query CCDS DB by Protein ID:ENSMUSP00000109917
Original member Current member NCBI NM_001177367.1 NP_001170838.1 Accepted alive Link to Nucleotide Sequence:NM_001177367.1Link to Protein Sequence:NP_001170838.1Re-query CCDS DB by Nucleotide ID:NM_001177367Re-query CCDS DB by Protein ID:NP_001170838Link to BLAST:NP_001170838.1
Original member Current member NCBI NM_001289453.1 NP_001276382.1 Accepted alive Link to Nucleotide Sequence:NM_001289453.1Link to Protein Sequence:NP_001276382.1Re-query CCDS DB by Nucleotide ID:NM_001289453Re-query CCDS DB by Protein ID:NP_001276382Link to BLAST:NP_001276382.1
Original member Current member NCBI NM_001289454.1 NP_001276383.1 Accepted alive Link to Nucleotide Sequence:NM_001289454.1Link to Protein Sequence:NP_001276383.1Re-query CCDS DB by Nucleotide ID:NM_001289454Re-query CCDS DB by Protein ID:NP_001276383Link to BLAST:NP_001276383.1
Original member Current member NCBI NM_001289455.1 NP_001276384.1 Accepted alive Link to Nucleotide Sequence:NM_001289455.1Link to Protein Sequence:NP_001276384.1Re-query CCDS DB by Nucleotide ID:NM_001289455Re-query CCDS DB by Protein ID:NP_001276384Link to BLAST:NP_001276384.1
Original member Current member NCBI NM_001289456.1 NP_001276385.1 Accepted alive Link to Nucleotide Sequence:NM_001289456.1Link to Protein Sequence:NP_001276385.1Re-query CCDS DB by Nucleotide ID:NM_001289456Re-query CCDS DB by Protein ID:NP_001276385Link to BLAST:NP_001276385.1
Original member Current member NCBI NM_013524.3 NP_038552.1 Accepted alive Link to Nucleotide Sequence:NM_013524.3Link to Protein Sequence:NP_038552.1Re-query CCDS DB by Nucleotide ID:NM_013524Re-query CCDS DB by Protein ID:NP_038552Link to BLAST:NP_038552.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001170838.1 342 Q11131-2 342 100% 0 0
NP_001276382.1 342 Q11131-2 342 100% 0 0
NP_001276383.1 342 Q11131-2 342 100% 0 0
NP_001276384.1 342 Q11131-2 342 100% 0 0
NP_001276385.1 342 Q11131-2 342 100% 0 0
NP_038552.1 342 Q11131-2 342 100% 0 0

Chromosomal Locations for CCDS 15772.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 25424766 25424778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25424886 25425901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1029 nt):
ATGAATTGTATTGGGTACCACCCCACCAGGAGGCTGCGGGCCTGGGGCGGCCTAGCTGGAGGAGCAACAT
TCATGGTAATTTGGTTTTTCTGGCTGTGGGGATCAGCTCCTGGAAGTGCCCCTGTGCCTCAGTCCACACT
CACCATCCTTATCTGGCACTGGCCTTTCACCAACCGGCCGCCAGAGCTACCTGGTGACACCTGCACTCGC
TATGGCATGGCCAGCTGCCGTCTGAGTGCTAACCGGAGCCTGCTAGCCAGTGCTGATGCTGTGGTCTTCC
ACCACCGTGAGCTGCAAACCCGGCAATCTCTCCTACCCCTGGACCAGAGGCCACACGGACAGCCTTGGGT
CTGGGCCTCCATGGAATCGCCCAGTAATACCCATGGTCTCCATCGCTTCCGGGGCATCTTCAACTGGGTG
CTGAGCTATCGGCGTGATTCAGATATCTTTGTACCCTACGGTCGCTTGGAGCCTCTCTCTGGGCCCACAT
CCCCACTACCGGCCAAAAGCAGGATGGCTGCCTGGGTGATCAGCAATTTCCAGGAGCGGCAGCAGCGTGC
AAAGCTGTACCGGCAGCTGGCCCCTCATCTGCAGGTGGATGTGTTCGGTCGCGCCAGCGGACGGCCCCTA
TGCGCTAATTGTCTGCTGCCCACTTTGGCCCGGTACCGCTTCTACCTGGCCTTTGAGAACTCACAGCATC
GGGACTACATCACTGAGAAGTTCTGGCGCAATGCCCTGGCGGCTGGTGCTGTACCCGTGGCGCTGGGACC
TCCTCGGGCCACCTACGAGGCTTTTGTGCCACCAGATGCCTTTGTACACGTGGACGACTTCAGCTCTGCC
CGTGAACTGGCTGTCTTCCTCGTCAGCATGAATGAGAGTCGTTATCGTGGCTTCTTTGCTTGGCGAGACC
GGCTCCGTGTGCGGCTCCTGGGTGACTGGAGGGAGCGCTTCTGCACCATCTGTGCCCGCTACCCTTACTT
GCCCCGCAGCCAGGTCTATGAAGACCTTGAAAGCTGGTTCCAGGCTTGA

Translation (342 aa):
MNCIGYHPTRRLRAWGGLAGGATFMVIWFFWLWGSAPGSAPVPQSTLTILIWHWPFTNRPPELPGDTCTR
YGMASCRLSANRSLLASADAVVFHHRELQTRQSLLPLDQRPHGQPWVWASMESPSNTHGLHRFRGIFNWV
LSYRRDSDIFVPYGRLEPLSGPTSPLPAKSRMAAWVISNFQERQQRAKLYRQLAPHLQVDVFGRASGRPL
CANCLLPTLARYRFYLAFENSQHRDYITEKFWRNALAAGAVPVALGPPRATYEAFVPPDAFVHVDDFSSA
RELAVFLVSMNESRYRGFFAWRDRLRVRLLGDWRERFCTICARYPYLPRSQVYEDLESWFQA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH