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Report for CCDS15832.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15832.1 Public Mus musculus 2 Fcnb 23 108 98 CCDS HistoryNCBI Gene:14134Re-query CCDS DB by CCDS ID:15832.1Re-query CCDS DB by GeneID:14134See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 15832.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028179.14 ENSMUSP00000028179.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028179.14Link to Ensembl Protein Viewer:ENSMUSP00000028179.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000028179Re-query CCDS DB by Protein ID:ENSMUSP00000028179
Original member Current member NCBI NM_010190.1 NP_034320.1 Accepted alive Link to Nucleotide Sequence:NM_010190.1Link to Protein Sequence:NP_034320.1Re-query CCDS DB by Nucleotide ID:NM_010190Re-query CCDS DB by Protein ID:NP_034320Link to BLAST:NP_034320.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034320.1 314 O70497 314 100% 0 0

Chromosomal Locations for CCDS 15832.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 28076575 28076822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 28078247 28078381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 28079122 28079251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 28079622 28079749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 28079901 28079933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 28080586 28080621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 28080896 28080949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 28082906 28083019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 28084791 28084857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGGCCCTGGGATCTGCTGCACTATTCGTCTTGACCCTGACTGTCCATGCGGCTGGCACATGCCCAGAAC
TGAAGGTCCTAGATCTGGAAGGCTACAAGCAGCTCACCATCCTTCAAGGTTGCCCTGGCTTGCCTGGAGC
TGCAGGGCCCAAGGGAGAGGCAGGTGCCAAAGGAGATAGAGGAGAGAGTGGCCTTCCTGGAATTCCTGGA
AAAGAAGGACCAACTGGACCCAAAGGAAACCAAGGAGAAAAAGGAATACGTGGAGAAAAAGGAGACTCTG
GGCCCTCTCAGTCATGTGCTACAGGACCTCGGACCTGCAAGGAGTTGCTCACCCAGGGCCACTTTCTCAC
TGGCTGGTATACCATCTATCTGCCAGACTGCAGGCCCCTGACTGTGCTGTGTGACATGGACACAGATGGT
GGAGGCTGGACCGTCTTCCAGAGGAGGCTTGACGGCTCTGTGGACTTCTTTCGGGACTGGACCTCATACA
AGAGGGGCTTTGGCAGCCAACTAGGGGAGTTCTGGCTGGGGAATGATAATATCCACGCTCTAACCACCCA
GGGAACCAGTGAGCTGCGGGTGGATCTTTCAGACTTCGAAGGCAAGCATGACTTTGCCAAGTACAGCTCC
TTCCAGATCCAGGGAGAGGCCGAGAAATACAAGCTTATCCTGGGAAACTTCCTTGGCGGTGGTGCTGGTG
ACTCTCTGACACCCCATAACAACAGGTTATTCTCCACCAAAGACCAAGACAATGACGGCAGTACTTCCAG
CTGTGCCATGGGTTACCATGGAGCCTGGTGGTACTCCCAGTGCCACACTTCCAACCTGAATGGCCTCTAC
CTGAGGGGTCCCCATAAGAGCTATGCAAATGGTGTCAACTGGAAGTCATGGAGAGGGTACAACTACAGCT
GCAAGGTTTCTGAGATGAAGGTGCGGCTCATCTAG

Translation (314 aa):
MALGSAALFVLTLTVHAAGTCPELKVLDLEGYKQLTILQGCPGLPGAAGPKGEAGAKGDRGESGLPGIPG
KEGPTGPKGNQGEKGIRGEKGDSGPSQSCATGPRTCKELLTQGHFLTGWYTIYLPDCRPLTVLCDMDTDG
GGWTVFQRRLDGSVDFFRDWTSYKRGFGSQLGEFWLGNDNIHALTTQGTSELRVDLSDFEGKHDFAKYSS
FQIQGEAEKYKLILGNFLGGGAGDSLTPHNNRLFSTKDQDNDGSTSSCAMGYHGAWWYSQCHTSNLNGLY
LRGPHKSYANGVNWKSWRGYNYSCKVSEMKVRLI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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