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Report for CCDS15924.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15924.1 Public Mus musculus 2 Ak1 23 108 98 CCDS HistoryNCBI Gene:11636Re-query CCDS DB by CCDS ID:15924.1Re-query CCDS DB by GeneID:11636See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15924.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000068271.4 ENSMUSP00000068479.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000068271.4Link to Ensembl Protein Viewer:ENSMUSP00000068479.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000068271Re-query CCDS DB by Protein ID:ENSMUSP00000068479
Original member Current member NCBI NM_021515.3 NP_067490.1 Accepted alive Link to Nucleotide Sequence:NM_021515.3Link to Protein Sequence:NP_067490.1Re-query CCDS DB by Nucleotide ID:NM_021515Re-query CCDS DB by Protein ID:NP_067490Link to BLAST:NP_067490.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067490.1 210 Q9R0Y5-2 210 100% 0 0

Chromosomal Locations for CCDS 15924.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 32629562 32629616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32629849 32629884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32630235 32630398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32631076 32631192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32633294 32633485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32633641 32633709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (633 nt):
ATGGGCTGCTGTGTGTCTAGTGAACCCCAAGAAGAGGGAGGCAGAAAGACTGGAGAGAAGCTGAAGAAGG
CCAAGATCATCTTTGTGGTGGGCGGACCTGGCTCAGGAAAGGGCACCCAGTGCGAGAAGATTGTACAGAA
ATATGGCTACACCCACCTGTCTACTGGGGACCTGCTTCGGGCAGAAGTCAGCTCTGGATCGGAGAGGGGC
AAGAAGCTGTCGGCTATCATGGAGAAGGGAGAGCTAGTGCCACTGGACACGGTGCTGGACATGCTCCGAG
ATGCTATGTTAGCCAAAGTGGATTCTTCCAATGGCTTCCTGATCGACGGCTACCCGAGGGAGGTGAAACA
GGGAGAAGAATTTGAACAGAAGATTGGACAGCCCACACTGCTGCTGTATGTGGACGCAGGCGCCGAGACC
ATGACCCAACGACTCCTGAAGCGAGGGGAGACCAGTGGCCGCGTGGATGACAACGAGGAGACCATCAAGA
AGCGGCTGGAGACTTATTACAATGCCACAGAACCTGTCATCTCCTTCTATGACAAGCGTGGCATTGTGCG
CAAGGTCAATGCCGAAGGCACGGTGGACACTGTCTTCTCTGAGGTCTGCACCTATCTTGACTCCCTGAAG
TAA

Translation (210 aa):
MGCCVSSEPQEEGGRKTGEKLKKAKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSERG
KKLSAIMEKGELVPLDTVLDMLRDAMLAKVDSSNGFLIDGYPREVKQGEEFEQKIGQPTLLLYVDAGAET
MTQRLLKRGETSGRVDDNEETIKKRLETYYNATEPVISFYDKRGIVRKVNAEGTVDTVFSEVCTYLDSLK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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