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Report for CCDS1598.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1598.1 Public Homo sapiens 1 MAP3K21 24 110 108 CCDS HistoryNCBI Gene:84451Re-query CCDS DB by CCDS ID:1598.1Re-query CCDS DB by GeneID:84451See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1598.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000366624.8 ENSP00000355583.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000366624.8Link to Ensembl Protein Viewer:ENSP00000355583.3Re-query CCDS DB by Nucleotide ID:ENST00000366624Re-query CCDS DB by Protein ID:ENSP00000355583
Original member Current member NCBI NM_032435.3 NP_115811.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032435.3Link to Protein Sequence:NP_115811.2Re-query CCDS DB by Nucleotide ID:NM_032435Re-query CCDS DB by Protein ID:NP_115811Link to BLAST:NP_115811.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115811.2 1036 Q5TCX8-1 1036 100% 0 0

Chromosomal Locations for CCDS 1598.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 233328029 233328833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 233346442 233346622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 233353807 233353955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 233354836 233355011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 233362053 233362293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 233372038 233372160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 233375916 233376066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 233376430 233376527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 233378931 233379710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 233382305 233382711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3111 nt):
ATGGCTTTGCGGGGCGCCGCGGGAGCGACCGACACCCCGGTGTCCTCGGCCGGGGGAGCCCCCGGCGGCT
CAGCGTCCTCGTCGTCCACCTCCTCGGGCGGCTCGGCCTCGGCGGGCGCGGGGCTGTGGGCCGCGCTCTA
TGACTACGAGGCTCGCGGCGAGGACGAGCTGAGCCTGCGGCGCGGCCAGCTGGTGGAGGTGCTGTCGCAG
GACGCCGCCGTGTCGGGCGACGAGGGCTGGTGGGCAGGCCAGGTGCAGCGGCGCCTCGGCATCTTCCCCG
CCAACTACGTGGCTCCCTGCCGCCCGGCCGCCAGCCCCGCGCCGCCGCCCTCGCGGCCCAGCTCCCCGGT
ACACGTCGCCTTCGAGCGGCTGGAGCTGAAGGAGCTCATCGGCGCTGGGGGCTTCGGGCAGGTGTACCGC
GCCACCTGGCAGGGCCAGGAGGTGGCCGTGAAGGCGGCGCGCCAGGACCCGGAGCAGGACGCGGCGGCGG
CTGCCGAGAGCGTGCGGCGCGAGGCTCGGCTCTTCGCCATGCTGCGGCACCCCAACATCATCGAGCTGCG
CGGCGTGTGCCTGCAGCAGCCGCACCTCTGCCTGGTGCTGGAGTTCGCCCGCGGCGGAGCGCTCAACCGA
GCGCTGGCCGCTGCCAACGCCGCCCCGGACCCGCGCGCGCCCGGCCCCCGCCGCGCGCGCCGCATCCCTC
CGCACGTGCTGGTCAACTGGGCCGTGCAGATAGCGCGGGGCATGCTCTACCTGCATGAGGAGGCCTTCGT
GCCCATCCTGCACCGGGACCTCAAGTCCAGCAACATTTTGCTACTTGAGAAGATAGAACATGATGACATC
TGCAATAAAACTTTGAAGATTACAGATTTTGGGTTGGCGAGGGAATGGCACAGGACCACCAAAATGAGCA
CAGCAGGCACCTATGCCTGGATGGCCCCCGAAGTGATCAAGTCTTCCTTGTTTTCTAAGGGAAGCGACAT
CTGGAGCTATGGAGTGCTGCTGTGGGAACTGCTCACCGGAGAAGTCCCCTATCGGGGCATTGATGGCCTC
GCCGTGGCTTATGGGGTAGCAGTCAATAAACTCACTTTGCCCATTCCATCCACCTGCCCTGAGCCGTTTG
CCAAGCTCATGAAAGAATGCTGGCAACAAGACCCTCATATTCGTCCATCGTTTGCCTTAATTCTCGAACA
GTTGACTGCTATTGAAGGGGCAGTGATGACTGAGATGCCTCAAGAATCTTTTCATTCCATGCAAGATGAC
TGGAAACTAGAAATTCAACAAATGTTTGATGAGTTGAGAACAAAGGAAAAGGAGCTGCGATCCCGGGAAG
AGGAGCTGACTCGGGCGGCTCTGCAGCAGAAGTCTCAGGAGGAGCTGCTAAAGCGGCGTGAGCAGCAGCT
GGCAGAGCGCGAGATCGACGTGCTGGAGCGGGAACTTAACATTCTGATATTCCAGCTAAACCAGGAGAAG
CCCAAGGTAAAGAAGAGGAAGGGCAAGTTTAAGAGAAGTCGTTTAAAGCTCAAAGATGGACATCGAATCA
GTTTACCTTCAGATTTCCAGCACAAGATAACCGTGCAGGCCTCTCCCAACTTGGACAAACGGCGGAGCCT
GAACAGCAGCAGTTCCAGTCCCCCGAGCAGCCCCACAATGATGCCCCGACTCCGAGCCATACAGTTGACT
TCAGATGAAAGCAATAAAACTTGGGGAAGGAACACAGTCTTTCGACAAGAAGAATTTGAGGATGTAAAAA
GGAATTTTAAGAAAAAAGGTTGTACCTGGGGACCAAATTCCATTCAAATGAAAGATAGAACAGATTGCAA
AGAAAGGATAAGACCTCTCTCCGATGGCAACAGTCCTTGGTCAACTATCTTAATAAAAAATCAGAAAACC
ATGCCCTTGGCTTCATTGTTTGTGGACCAGCCAGGGTCCTGTGAAGAGCCAAAACTTTCCCCTGATGGAT
TAGAACACAGAAAACCAAAACAAATAAAATTGCCTAGTCAGGCCTACATTGATCTACCTCTTGGGAAAGA
TGCTCAGAGAGAGAATCCTGCAGAAGCTGAAAGCTGGGAGGAGGCAGCCTCTGCGAATGCTGCCACAGTC
TCCATTGAGATGACTCCTACGAATAGTCTGAGTAGATCCCCCCAGAGAAAGAAAACGGAGTCAGCTCTGT
ATGGGTGCACCGTCCTTCTGGCATCGGTGGCTCTGGGACTGGACCTCAGAGAGCTTCATAAAGCACAGGC
TGCTGAAGAACCGTTGCCCAAGGAAGAGAAGAAGAAACGAGAGGGAATCTTCCAGCGGGCTTCCAAGTCC
CGCAGAAGCGCCAGTCCTCCCACAAGCCTGCCATCCACCTGTGGGGAGGCCAGCAGCCCACCCTCCCTGC
CACTGTCAAGTGCCCTGGGCATCCTCTCCACACCTTCTTTCTCCACAAAGTGCCTGCTGCAGATGGACAG
TGAAGATCCACTGGTGGACAGTGCACCTGTCACTTGTGACTCTGAGATGCTCACTCCGGATTTTTGTCCC
ACTGCCCCAGGAAGTGGTCGTGAGCCAGCCCTCATGCCAAGACTTGACACTGATTGTAGTGTATCAAGAA
ACTTGCCGTCTTCCTTCCTACAGCAGACATGTGGGAATGTACCTTACTGTGCTTCTTCAAAACATAGACC
GTCACATCACAGACGGACCATGTCTGATGGAAATCCGACCCCAACTGGTGCAACTATTATCTCAGCCACT
GGAGCCTCTGCACTGCCACTCTGCCCCTCACCTGCTCCTCACAGTCATCTGCCAAGGGAGGTCTCACCCA
AGAAGCACAGCACTGTCCACATCGTGCCTCAGCGTCGCCCTGCCTCCCTGAGAAGCCGCTCAGATCTGCC
TCAGGCTTACCCACAGACAGCAGTGTCTCAGCTGGCACAGACTGCCTGTGTAGTGGGTCGCCCAGGACCA
CATCCCACCCAATTCCTCGCTGCCAAGGAGAGAACTAAATCCCATGTGCCTTCATTACTGGATGCTGACG
TGGAAGGTCAGAGCAGGGACTACACTGTGCCACTGTGCAGAATGAGGAGCAAAACCAGCCGGCCATCTAT
ATATGAACTGGAGAAAGAATTCCTGTCTTAA

Translation (1036 aa):
MALRGAAGATDTPVSSAGGAPGGSASSSSTSSGGSASAGAGLWAALYDYEARGEDELSLRRGQLVEVLSQ
DAAVSGDEGWWAGQVQRRLGIFPANYVAPCRPAASPAPPPSRPSSPVHVAFERLELKELIGAGGFGQVYR
ATWQGQEVAVKAARQDPEQDAAAAAESVRREARLFAMLRHPNIIELRGVCLQQPHLCLVLEFARGGALNR
ALAAANAAPDPRAPGPRRARRIPPHVLVNWAVQIARGMLYLHEEAFVPILHRDLKSSNILLLEKIEHDDI
CNKTLKITDFGLAREWHRTTKMSTAGTYAWMAPEVIKSSLFSKGSDIWSYGVLLWELLTGEVPYRGIDGL
AVAYGVAVNKLTLPIPSTCPEPFAKLMKECWQQDPHIRPSFALILEQLTAIEGAVMTEMPQESFHSMQDD
WKLEIQQMFDELRTKEKELRSREEELTRAALQQKSQEELLKRREQQLAEREIDVLERELNILIFQLNQEK
PKVKKRKGKFKRSRLKLKDGHRISLPSDFQHKITVQASPNLDKRRSLNSSSSSPPSSPTMMPRLRAIQLT
SDESNKTWGRNTVFRQEEFEDVKRNFKKKGCTWGPNSIQMKDRTDCKERIRPLSDGNSPWSTILIKNQKT
MPLASLFVDQPGSCEEPKLSPDGLEHRKPKQIKLPSQAYIDLPLGKDAQRENPAEAESWEEAASANAATV
SIEMTPTNSLSRSPQRKKTESALYGCTVLLASVALGLDLRELHKAQAAEEPLPKEEKKKREGIFQRASKS
RRSASPPTSLPSTCGEASSPPSLPLSSALGILSTPSFSTKCLLQMDSEDPLVDSAPVTCDSEMLTPDFCP
TAPGSGREPALMPRLDTDCSVSRNLPSSFLQQTCGNVPYCASSKHRPSHHRRTMSDGNPTPTGATIISAT
GASALPLCPSPAPHSHLPREVSPKKHSTVHIVPQRRPASLRSRSDLPQAYPQTAVSQLAQTACVVGRPGP
HPTQFLAAKERTKSHVPSLLDADVEGQSRDYTVPLCRMRSKTSRPSIYELEKEFLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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