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Report for CCDS16086.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16086.1 Public Mus musculus 2 Cers6 23 108 98 CCDS HistoryNCBI Gene:241447Re-query CCDS DB by CCDS ID:16086.1Re-query CCDS DB by GeneID:241447See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16086.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028426.8 ENSMUSP00000028426.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028426.8Link to Ensembl Protein Viewer:ENSMUSP00000028426.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000028426Re-query CCDS DB by Protein ID:ENSMUSP00000028426
Original member NCBI NM_172856.4 NP_766444.1 Updated not alive Link to Nucleotide Sequence:NM_172856.4Link to Protein Sequence:NP_766444.1Re-query CCDS DB by Nucleotide ID:NM_172856Re-query CCDS DB by Protein ID:NP_766444
Current member NCBI NM_172856.5 NP_766444.1 Accepted alive Link to Nucleotide Sequence:NM_172856.5Link to Protein Sequence:NP_766444.1Re-query CCDS DB by Nucleotide ID:NM_172856Re-query CCDS DB by Protein ID:NP_766444Link to BLAST:NP_766444.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766444.1 384 Q8C172 384 100% 0 0

Chromosomal Locations for CCDS 16086.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 68861636 68861805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 68934515 68934620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 68947227 68947357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69002747 69002804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69047145 69047195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69050780 69050872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69068629 69068757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69071332 69071438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69105003 69105159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69108442 69108594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1155 nt):
ATGGCAGGGATCTTAGCCTGGTTCTGGAACGAGCGGTTTTGGCTTCCGCACAATGTCACCTGGGCAGACC
TGAAGAACACGGAGGAAGCCACCTTTCCGCAGGCGGAGGACCTCTACCTTGCCTTCCCCTTGGCCTTCTG
CATCTTCATGGTGCGGCTCATCTTCGAGAGATTCATAGCCAAACCATGTGCCATAGCCCTCAACATCCAA
GCCAATGGACCACAAACTGCCCAGCCAAATGCCATTCTGGAAAAGGTTTTCACTGCTATAACAAAGCATC
CTGATGAAAAGAGATTAGAAGGGCTCTCCAAGCAGCTGGACTGGGATGTTCGGAGCATTCAACGCTGGTT
TCGACAAAGACGCAACCAGGAGAAACCCAGCACTCTGACCAGGTTCTGTGAGAGCATGTGGAGATTTTCC
TTTTACCTCTATGTATTTAGCTACGGAGTCCGGTTCTTGAAACAGACCCCTTGGTTGTGGAATACAAGAC
ACTGCTGGTATAACTACCCTTACCAGCCACTCACAGCTGACCTTCACTACTATTACATCCTGGAGCTGTC
ATTTTATTGGTCTTTAATGGTTTCCCAGTTCACAGATATCAAAAGGAAGGACTTCGGCATTATGTTCCTG
CACCACCTTGCAACAATTTTCTTAATAACCTTTTCATATGTCAACAACATGGCCCGAGTAGGAACCCTGG
TCCTCTGTCTTCACGACTCAGCCGATGCTCTGCTAGAGGCTGCCAAAATGGCAAATTACGCCAAATTTCA
GAAAATGTGTGATCTCCTGTTTGTCATGTTTGCCGTGGTTTTTATCACCACACGGCTGGGCATATTTCCT
CTCTGGGTGTTGAATACCACATTATTTGAAAGTTGGGAGATCGTCGGACCCTACCCTTCCTGGTGGGTTT
TTAACCTGCTGCTCTTGTTACTACAAGGGTTGAACTGCTTCTGGTCTTACCTGATTGTAAAAATAGCTTG
CAAAACTGTTTCAAAAGGCAAGGTATCCAAGGATGACCGGAGTGACATTGAATCTAGCTCAGATGATGAG
GACTCAGAGCCTCCAGGGAAGAAACCACACTCTTCAACAACCACCAACGGAACCAGCGGTACCAATGGGT
ACCTCCTCACTGGTCCTTGTTCCGTGGATGATTAA

Translation (384 aa):
MAGILAWFWNERFWLPHNVTWADLKNTEEATFPQAEDLYLAFPLAFCIFMVRLIFERFIAKPCAIALNIQ
ANGPQTAQPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQRRNQEKPSTLTRFCESMWRFS
FYLYVFSYGVRFLKQTPWLWNTRHCWYNYPYQPLTADLHYYYILELSFYWSLMVSQFTDIKRKDFGIMFL
HHLATIFLITFSYVNNMARVGTLVLCLHDSADALLEAAKMANYAKFQKMCDLLFVMFAVVFITTRLGIFP
LWVLNTTLFESWEIVGPYPSWWVFNLLLLLLQGLNCFWSYLIVKIACKTVSKGKVSKDDRSDIESSSDDE
DSEPPGKKPHSSTTTNGTSGTNGYLLTGPCSVDD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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