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Report for CCDS16103.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16103.2 Public Mus musculus 2 Mettl5 23 108 98 CCDS HistoryNCBI Gene:75422Re-query CCDS DB by CCDS ID:16103.2Re-query CCDS DB by GeneID:75422See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 16103.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000060447.12 ENSMUSP00000050907.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000060447.12Link to Ensembl Protein Viewer:ENSMUSP00000050907.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000060447Re-query CCDS DB by Protein ID:ENSMUSP00000050907
Original member Current member NCBI NM_029280.4 NP_083556.2 Accepted alive Link to Nucleotide Sequence:NM_029280.4Link to Protein Sequence:NP_083556.2Re-query CCDS DB by Nucleotide ID:NM_029280Re-query CCDS DB by Protein ID:NP_083556Link to BLAST:NP_083556.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083556.2 209 Q8K1A0 209 100% 0 0

Chromosomal Locations for CCDS 16103.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 69871278 69871316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69871732 69871781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69873884 69873935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69879102 69879184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69880767 69880948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69881297 69881411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69885249 69885357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (630 nt):
ATGAAGAAGTTAAAGCTTAAGGAACTAGAGAGTCGCCTGCAAGAAGTGGATGGATTCGAAAAGCCCAAGT
TACTTCTAGAACAGTATCCCACCAGGCCGCACATTGCAGCATGCATGCTTTATACAATCCATAACACATA
CGATGACATTGAAAACAAAGCGGTTGCAGATCTAGGATGTGGCTGTGGAGTACTTAGCATCGGAGCGGCA
ATGCTAGGAGCAGGGTTGTGTGTTGGATTTGACATAGATGAAGATGCACTGGAAATATTTAATAAGAATG
TGGAAGAGTTTGAGCTAACAAATGTTGATATGATTCAGTGTGATGTGTACTCATTATCTAACAGAATGTC
CAAGTTATTTGATACAGTAATTATGAATCCTCCCTTTGGGACCAAAAATAATAAAGGGACAGATATGGCT
TTTCTGAAGACTGCTTTGGGAATGGCAAGAACAGCAGTATATTCTTTACACAAGTCCTCAACTAGGGAAC
ATATTCAAAAGAAAGCTGCTGAATGGAAAGTCAAGATAGAAATTATTGCAGAGCTTCGATATGATCTACC
AGCATTATACAACTTTCATAAAAAGAAATCTGTGGACATCGAAGTGGACCTAATTCGCTTTTCTTTTTAA

Translation (209 aa):
MKKLKLKELESRLQEVDGFEKPKLLLEQYPTRPHIAACMLYTIHNTYDDIENKAVADLGCGCGVLSIGAA
MLGAGLCVGFDIDEDALEIFNKNVEEFELTNVDMIQCDVYSLSNRMSKLFDTVIMNPPFGTKNNKGTDMA
FLKTALGMARTAVYSLHKSSTREHIQKKAAEWKVKIEIIAELRYDLPALYNFHKKKSVDIEVDLIRFSF


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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