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Report for CCDS16211.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16211.1 Public Mus musculus 2 Or5g23 23 108 98 CCDS HistoryNCBI Gene:257899Re-query CCDS DB by CCDS ID:16211.1Re-query CCDS DB by GeneID:257899See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 16211.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000099921.1 ENSMUSP00000097505.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000099921.1Link to Ensembl Protein Viewer:ENSMUSP00000097505.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000099921Re-query CCDS DB by Protein ID:ENSMUSP00000097505
Original member Current member EBI ENSMUST00000213837.1 ENSMUSP00000149982.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000213837.1Link to Ensembl Protein Viewer:ENSMUSP00000149982.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000213837Re-query CCDS DB by Protein ID:ENSMUSP00000149982
Original member Current member EBI ENSMUST00000216571.1 ENSMUSP00000150731.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000216571.1Link to Ensembl Protein Viewer:ENSMUSP00000150731.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000216571Re-query CCDS DB by Protein ID:ENSMUSP00000150731
Original member Current member NCBI NM_001011695.1 NP_001011695.1 Accepted alive Link to Nucleotide Sequence:NM_001011695.1Link to Protein Sequence:NP_001011695.1Re-query CCDS DB by Nucleotide ID:NM_001011695Re-query CCDS DB by Protein ID:NP_001011695Link to BLAST:NP_001011695.1

Chromosomal Locations for CCDS 16211.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 85607964 85608908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGGAAGAAAAGAATCAGACTGTCATGCCTGAGTTTCTCTTCCGTGGCATTACAGATAACCTCCATCAGA
AGATTGTCATCTTCATCATTTTTTTCTTTGTTTATCTTGTTACTCTTGGGGGTAATGTGGGGATGATCAC
TCTCATATGGTTGGACCCCAGGCTGCACACACCTATGTACTTTTTTCTCAGCCAACTGTCCTTTGTAGAT
GTGTCTTCCTCTTCTTCCATAGCTCCCAAGATGCTGTGTGACATTTTTGCAAGGAACAAAGCCATCTCTT
TTGTGGGCTGTGCAACACAGATGTGGTTCTTTGGTCTCTTTGTGGCAACTGAATGCTTTCTCCTGGCTGC
CATGGCATATGATCGGTATGCAGCCATATGTAAGCCCTTGCTGTACACACTTATTATGTCTCCACATCTC
TGTATGTTGTTGGTTGTTGGGATTTATTTCATTGCTCTTATAAGTACAATGATACACACAACTTTGACCT
TTTGCTTACCATTCTGTGGTCCATATATTATCAACCACTTTTTCTGTGATGTTTCTCCATTGCTGTCTCT
AGCATGTACTGACACGCAGATGATTAAGTTGGTGTTTTTTGTCTTGGCTGGCACAGTAGGTATGTTCACT
GGTCTGATAATTCTGGGGTCCTATGTATGCATCTTGAAGGCAATTTTGAAGATTCAGACAGCCAATGGGA
GACAAAAAGCCTTCTCAACTTGTTCCTCTCACTTGGTGACTGTCGCTATCCTGTATGGGACTCTTTTCTT
CATCTATGTTCGACCCAATGCCAGTTCCTCCTTGAATATTAATAAAGTGATCTCTTTATTTTACACTGTG
GTGATCCCCATGTTGAATCCCCTCATCTACAGCTTGAGGAACCAAGAGGTAAAAAATGCATTCAGGAGAA
CTTTGAAGAAGAAGCACTTCCTAATAGGTGTTTAA

Translation (314 aa):
MEEKNQTVMPEFLFRGITDNLHQKIVIFIIFFFVYLVTLGGNVGMITLIWLDPRLHTPMYFFLSQLSFVD
VSSSSSIAPKMLCDIFARNKAISFVGCATQMWFFGLFVATECFLLAAMAYDRYAAICKPLLYTLIMSPHL
CMLLVVGIYFIALISTMIHTTLTFCLPFCGPYIINHFFCDVSPLLSLACTDTQMIKLVFFVLAGTVGMFT
GLIILGSYVCILKAILKIQTANGRQKAFSTCSSHLVTVAILYGTLFFIYVRPNASSSLNINKVISLFYTV
VIPMLNPLIYSLRNQEVKNAFRRTLKKKHFLIGV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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