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Report for CCDS1631.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1631.1 Public Homo sapiens 1 ZNF496 24 110 108 CCDS HistoryNCBI Gene:84838Re-query CCDS DB by CCDS ID:1631.1Re-query CCDS DB by GeneID:84838See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1631.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000294753.8 ENSP00000294753.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000294753.8Link to Ensembl Protein Viewer:ENSP00000294753.4Re-query CCDS DB by Nucleotide ID:ENST00000294753Re-query CCDS DB by Protein ID:ENSP00000294753
Original member Current member EBI ENST00000682384.1 ENSP00000507236.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000682384.1Link to Ensembl Protein Viewer:ENSP00000507236.1Re-query CCDS DB by Nucleotide ID:ENST00000682384Re-query CCDS DB by Protein ID:ENSP00000507236
Original member Current member NCBI NM_032752.3 NP_116141.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032752.3Link to Protein Sequence:NP_116141.1Re-query CCDS DB by Nucleotide ID:NM_032752Re-query CCDS DB by Protein ID:NP_116141Link to BLAST:NP_116141.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116141.1 587 Q96IT1-1 587 100% 0 0

Chromosomal Locations for CCDS 1631.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 247300519 247301276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 247308475 247308588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 247309699 247309806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 247310324 247310456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 247323154 247323230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 247328683 247328866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 247329189 247329578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1764 nt):
ATGCCCACAGCCCTGTGCCCCCGAGTCTTGGCTCCGAAGGAAAGTGAGGAGCCCAGGAAAATGAGGAGCC
CACCTGGAGAGAACCCTAGCCCCCAGGGGGAGCTTCCCAGCCCCGAGTCCTCTCGGCGTCTCTTCCGCCG
TTTCCGCTACCAGGAGGCGGCGGGCCCCCGGGAGGCCCTGCAGCGCCTCTGGGACCTGTGCGGGGGCTGG
CTGCGGCCTGAGAGGCACACCAAGGAGCAGATTCTGGAGCTGCTGGTGCTGGAGCAGTTCCTGGCCATCC
TGCCCCGGGAGATCCAGAGCTGGGTGCGGGCGCAGGAGCCTGAGAGCGGAGAGCAGGCTGTGGCCGCGGT
GGAGGCACTGGAACGGGAGCCCGGGAGACCCTGGCAGTGGCTCAAGCACTGTGAAGACCCTGTGGTGATT
GATGATGGGGACAGCCCTCTGGACCAGGAGCAGGAGCAGCTGCCGGTAGAGCCCCACAGCGACCTTGCAA
AGAACCAGGATGCCCAGCCCATAACCCTGGCACAGTGCCTGGGGCTCCCAAGCAGACCACCAAGCCAGCT
CAGCGGGGACCCAGTTCTGCAAGATGCTTTCCTTCTTCAGGAAGAGAATGTGCGGGACACACAGCAGGTG
ACCACCCTCCAGCTACCCCCGAGTCGGGTTTCTCCATTCAAGGACATGATTTTATGCTTCTCTGAAGAGG
ATTGGTCCCTTCTAGATCCTGCCCAGACTGGCTTCTATGGAGAGTTCATCATTGGGGAGGATTACGGGGT
CTCAATGCCTCCAAACGACCTAGCTGCCCAGCCAGATCTCTCCCAGGGAGAGGAGAATGAGCCACGCGTT
CCAGAGTTGCAGGATCTCCAGGGCAAAGAAGTGCCCCAGGTCTCCTACTTGGACTCTCCAAGTCTCCAGC
CATTCCAGGTAGAAGAAAGAAGGAAACGTGAGGAGCTGCAGGTGCCAGAGTTCCAGGCCTGCCCACAGAC
GGTGGTGCCTCAAAACACCTACCCAGCTGGCGGCAACCCGCGATCTCTAGAGAACAGCCTGGATGAAGAA
GTGACCATCGAGATCGTTCTCTCCAGCTCTGGGGACGAGGACTCCCAGCATGGCCCGTACTGCACAGAAG
AGCTGGGGAGCCCCACAGAGAAGCAGCGCAGCCTCCCCGCCTCCCACCGGAGCAGCACCGAGGCCGGAGG
CGAGGTGCAGACCTCCAAGAAGTCCTACGTGTGTCCGAACTGTGGGAAAATCTTCCGCTGGAGGGTCAAC
TTCATCCGGCATCTGCGGAGCCGCAGGGAGCAGGAGAAGCCGCACGAGTGCTCGGTGTGCGGGGAGCTGT
TCAGCGACAGCGAGGACCTGGATGGGCACCTAGAGAGCCACGAGGCCCAGAAGCCTTACCGGTGTGGTGC
CTGCGGGAAGAGCTTCCGCCTGAACTCCCACCTGCTCTCCCACCGGCGGATACACCTGCAGCCGGACAGA
CTCCAGCCGGTGGAGAAGAGAGAGCAGGCGGCATCCGAGGACGCGGACAAGGGTCCCAAAGAGCCGCTGG
AAAACGGCAAGGCCAAACTGAGCTTCCAGTGCTGTGAGTGTGGGAAGGCCTTCCAGCGGCACGACCACCT
GGCTCGGCACCGCAGCCACTTTCACCTGAAGGACAAAGCCCGGCCCTTCCAGTGCCGGTACTGCGTCAAG
AGCTTCACGCAGAACTATGACCTCCTCCGCCACGAGCGCCTGCACATGAAGCGCCGTTCCAAGCAGGCTC
TGAACTCCTACTGA

Translation (587 aa):
MPTALCPRVLAPKESEEPRKMRSPPGENPSPQGELPSPESSRRLFRRFRYQEAAGPREALQRLWDLCGGW
LRPERHTKEQILELLVLEQFLAILPREIQSWVRAQEPESGEQAVAAVEALEREPGRPWQWLKHCEDPVVI
DDGDSPLDQEQEQLPVEPHSDLAKNQDAQPITLAQCLGLPSRPPSQLSGDPVLQDAFLLQEENVRDTQQV
TTLQLPPSRVSPFKDMILCFSEEDWSLLDPAQTGFYGEFIIGEDYGVSMPPNDLAAQPDLSQGEENEPRV
PELQDLQGKEVPQVSYLDSPSLQPFQVEERRKREELQVPEFQACPQTVVPQNTYPAGGNPRSLENSLDEE
VTIEIVLSSSGDEDSQHGPYCTEELGSPTEKQRSLPASHRSSTEAGGEVQTSKKSYVCPNCGKIFRWRVN
FIRHLRSRREQEKPHECSVCGELFSDSEDLDGHLESHEAQKPYRCGACGKSFRLNSHLLSHRRIHLQPDR
LQPVEKREQAASEDADKGPKEPLENGKAKLSFQCCECGKAFQRHDHLARHRSHFHLKDKARPFQCRYCVK
SFTQNYDLLRHERLHMKRRSKQALNSY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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