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Report for CCDS16600.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16600.1 Public Mus musculus 2 Dll4 23 108 98 CCDS HistoryNCBI Gene:54485Re-query CCDS DB by CCDS ID:16600.1Re-query CCDS DB by GeneID:54485See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16600.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000102517.3 ENSMUSP00000099575.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000102517.3Link to Ensembl Protein Viewer:ENSMUSP00000099575.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000102517Re-query CCDS DB by Protein ID:ENSMUSP00000099575
Original member NCBI NM_019454.3 NP_062327.2 Updated not alive Link to Nucleotide Sequence:NM_019454.3Link to Protein Sequence:NP_062327.2Re-query CCDS DB by Nucleotide ID:NM_019454Re-query CCDS DB by Protein ID:NP_062327
Current member NCBI NM_019454.4 NP_062327.2 Accepted alive Link to Nucleotide Sequence:NM_019454.4Link to Protein Sequence:NP_062327.2Re-query CCDS DB by Nucleotide ID:NM_019454Re-query CCDS DB by Protein ID:NP_062327Link to BLAST:NP_062327.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062327.2 686 Q9JI71 686 100% 0 0

Chromosomal Locations for CCDS 16600.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 119326141 119326206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119326315 119326587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119327063 119327120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119327929 119328192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119328532 119328592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119328682 119328812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119330616 119330785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119330962 119331181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119332143 119332845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119334048 119334156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119334628 119334633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2061 nt):
ATGACGCCTGCGTCCCGGAGCGCCTGTCGCTGGGCGCTACTGCTGCTGGCGGTACTGTGGCCGCAGCAGC
GCGCTGCGGGCTCCGGCATCTTCCAGCTGCGGCTGCAGGAGTTCGTCAACCAGCGCGGTATGCTGGCCAA
TGGGCAGTCCTGCGAACCGGGCTGCCGGACTTTCTTCCGCATCTGCCTTAAGCACTTCCAGGCAACCTTC
TCCGAGGGACCCTGCACCTTTGGCAATGTCTCCACGCCGGTATTGGGCACCAACTCCTTCGTCGTCAGGG
ACAAGAATAGCGGCAGTGGTCGCAACCCTCTGCAGTTGCCCTTCAATTTCACCTGGCCGGGAACCTTCTC
ACTCAACATCCAAGCTTGGCACACACCGGGAGACGACCTGCGGCCAGAGACTTCGCCAGGAAACTCTCTC
ATCAGCCAAATCATCATCCAAGGCTCTCTTGCTGTGGGTAAGATTTGGCGAACAGACGAGCAAAATGACA
CCCTCACCAGACTGAGCTACTCTTACCGGGTCATCTGCAGTGACAACTACTATGGAGAGAGCTGTTCTCG
CCTATGCAAGAAGCGCGATGACCACTTCGGACATTATGAGTGCCAGCCAGATGGCAGCCTGTCCTGCCTG
CCGGGCTGGACTGGGAAGTACTGTGACCAGCCTATATGTCTTTCTGGCTGTCATGAGCAGAATGGTTACT
GCAGCAAGCCAGATGAGTGCATCTGCCGTCCAGGTTGGCAGGGTCGCCTGTGCAATGAATGTATCCCCCA
CAATGGCTGTCGTCATGGCACCTGCAGCATCCCCTGGCAGTGTGCCTGCGATGAGGGATGGGGAGGTCTG
TTTTGTGACCAAGATCTCAACTACTGTACTCACCACTCTCCGTGCAAGAATGGATCAACGTGTTCCAACA
GTGGGCCAAAGGGTTATACCTGCACCTGTCTCCCAGGCTACACTGGTGAGCACTGTGAGCTGGGACTCAG
CAAGTGTGCCAGCAACCCCTGTCGAAATGGTGGCAGCTGTAAGGACCAGGAGAATAGCTACCACTGCCTG
TGTCCCCCAGGCTACTATGGCCAGCACTGTGAGCATAGTACCTTGACCTGCGCGGACTCACCCTGCTTCA
ATGGGGGCTCTTGCCGGGAGCGCAACCAGGGGTCCAGTTATGCCTGCGAATGCCCCCCCAACTTTACCGG
CTCTAACTGTGAGAAGAAAGTAGACAGGTGTACCAGCAACCCGTGTGCCAATGGAGGCCAGTGCCAGAAC
AGAGGTCCAAGCCGAACCTGCCGCTGCCGGCCTGGATTCACAGGCACCCACTGTGAACTGCACATCAGCG
ATTGTGCCCGAAGTCCCTGTGCCCACGGGGGCACTTGCCACGATCTGGAGAATGGGCCTGTGTGCACCTG
CCCCGCTGGCTTCTCTGGAAGGCGCTGCGAGGTGCGGATAACCCACGATGCCTGTGCCTCCGGACCCTGC
TTCAATGGGGCCACCTGCTACACTGGCCTCTCCCCAAACAACTTCGTCTGCAACTGTCCTTATGGCTTTG
TGGGCAGCCGCTGCGAGTTTCCCGTGGGCTTGCCACCCAGCTTCCCCTGGGTAGCTGTCTCGCTGGGCGT
GGGGCTAGTGGTACTGCTGGTGCTCCTGGTCATGGTGGTAGTGGCTGTGCGGCAGCTGCGGCTTCGGAGG
CCCGATGACGAGAGCAGGGAAGCCATGAACAATCTGTCAGACTTCCAGAAGGACAACCTAATCCCTGCCG
CCCAGCTCAAAAACACAAACCAGAAGAAGGAGCTGGAAGTGGACTGTGGTCTGGACAAGTCCAATTGTGG
CAAACTGCAGAACCACACATTGGACTACAATCTAGCCCCGGGACTCCTAGGACGGGGCGGCATGCCTGGG
AAGTATCCTCACAGTGACAAGAGCTTAGGAGAGAAGGTGCCACTTCGGTTACACAGTGAGAAGCCAGAGT
GTCGAATATCAGCCATTTGCTCTCCCAGGGACTCTATGTACCAATCAGTGTGTTTGATATCAGAAGAGAG
GAACGAGTGTGTGATTGCCACAGAGGTATAA

Translation (686 aa):
MTPASRSACRWALLLLAVLWPQQRAAGSGIFQLRLQEFVNQRGMLANGQSCEPGCRTFFRICLKHFQATF
SEGPCTFGNVSTPVLGTNSFVVRDKNSGSGRNPLQLPFNFTWPGTFSLNIQAWHTPGDDLRPETSPGNSL
ISQIIIQGSLAVGKIWRTDEQNDTLTRLSYSYRVICSDNYYGESCSRLCKKRDDHFGHYECQPDGSLSCL
PGWTGKYCDQPICLSGCHEQNGYCSKPDECICRPGWQGRLCNECIPHNGCRHGTCSIPWQCACDEGWGGL
FCDQDLNYCTHHSPCKNGSTCSNSGPKGYTCTCLPGYTGEHCELGLSKCASNPCRNGGSCKDQENSYHCL
CPPGYYGQHCEHSTLTCADSPCFNGGSCRERNQGSSYACECPPNFTGSNCEKKVDRCTSNPCANGGQCQN
RGPSRTCRCRPGFTGTHCELHISDCARSPCAHGGTCHDLENGPVCTCPAGFSGRRCEVRITHDACASGPC
FNGATCYTGLSPNNFVCNCPYGFVGSRCEFPVGLPPSFPWVAVSLGVGLVVLLVLLVMVVVAVRQLRLRR
PDDESREAMNNLSDFQKDNLIPAAQLKNTNQKKELEVDCGLDKSNCGKLQNHTLDYNLAPGLLGRGGMPG
KYPHSDKSLGEKVPLRLHSEKPECRISAICSPRDSMYQSVCLISEERNECVIATEV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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