NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS17596.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17596.1 Public Mus musculus 3 Pogz 23 108 98 CCDS HistoryNCBI Gene:229584Re-query CCDS DB by CCDS ID:17596.1Re-query CCDS DB by GeneID:229584See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17596.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000107270.8 ENSMUSP00000102891.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000107270.8Link to Ensembl Protein Viewer:ENSMUSP00000102891.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000107270Re-query CCDS DB by Protein ID:ENSMUSP00000102891
Original member Current member NCBI NM_172683.4 NP_766271.2 Accepted alive Link to Nucleotide Sequence:NM_172683.4Link to Protein Sequence:NP_766271.2Re-query CCDS DB by Nucleotide ID:NM_172683Re-query CCDS DB by Protein ID:NP_766271Link to BLAST:NP_766271.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766271.2 1409 Q8BZH4 1409 100% 0 0

Chromosomal Locations for CCDS 17596.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 94853951 94854074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 94856043 94856201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 94860796 94860971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 94862422 94862530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 94864088 94864378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 94864458 94864667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 94870080 94870186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 94870988 94871325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 94872273 94872427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 94874594 94874694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 94875100 94875246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 94876636 94876770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 94876914 94877083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 94877236 94877376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 94877931 94877987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 94878156 94878268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 94878522 94878546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 94878661 94880332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4230 nt):
ATGGCGGACACCGACCTGTTTATGGAATGTGAGGAGGAGGAACTGGAGCCATGGCAGAAAATCAGTGATG
TCATTGAGGACTCTGTAGTTGAAGATTACAATTCTGTGGATAAAACTACTTCCGTTTCTGTGAGCCAGCA
GCCAGTCTCAGCTCCAGTGCCCATTGCTGCCCATGCTTCTGTTGCTGGGCACCTCTCTACATCCACTACT
GTTAGTAACAGTGGGGCACAGAACAGCGACAGTACAAAGAAGACTCTTGTCACACTAATTGCCAACAACA
ATGCTGGTAATACTTTGGTCCAGCAAGGTGGACAGCCACTCATCCTCACCCAAAACCCAGCACCAGGTCT
GGGAACAATGGTTACTCAACCAGTATTGAGACCTGTCCAGGTCATGCAGAATGCCAATCATGTGACTAGC
TCCCCTGTGGCCTCACAACCTATCTTCATCACTACCCAGGGATTTCCTGTAAGGAATGTTCGGCCTGTAC
AAAATGCAATGAATCAGGTTGGGATTGTGCTGAACGTACAGCAAGGCCAAACAGTTAGACCAATTACATT
GGTCCCAGCCCCAGGTACACAGTTTGTTAAGCCGACAGTTGGCGTCCCACAAGTGTTCTCTCAGATGACC
CCCGTGAGGCCAGGCTCCACAATGCCTGTGAGGCCCACCACCAACACCTTTACCACCGTCATCCCAGCTA
CTCTCACCATCCGAAGCACTGTCCCACAGTCCCAGTCCCAGCAGACCAAGTCCACCCCCAGTACCTCCAC
TACTCCCACTGCCACACAACCAACCTCACTGGGGCAGCTAGCTGGTCAGCCTCCAGGCCAGTCCAACCAG
ACCTCGAATCCCAAACTAGCTCCCTCCTTCCCCTCTCCACCTGCAGTGAGCATTGCCAGCTTTGTCACTG
TGAAGCGACCTGGGGTTACAGGTGAAAATAGCAACGAAGTGGCCAAATTGGTGAATACTCTTAACACTGT
CCCTTCCCTGGGCCAGAGTCCTGGGCCCGTGGTGGTGTCCAACAACAGTTCTGCTCAAAGAACCAGTGGG
CCCGAATCTTCAGTGAAAGTGACCTCTTCCATCCCAGTGTTTGACCTCCAGGACGGTGGACGGAAAATAT
GTCCACGGTGTAATGCCCAGTTCCGTGTTACTGAAGCTCTGAGAGGTCACATGTGTTACTGCTGCCCTGA
AATGGTTGAGTACCAAAAGAAAGGCAAGTCCCTCGATGCAGAGCCCAGTGTCCCATCGGCAGCAAAGCCC
TCGTCCCCTGAGAAGACAGCCCCTGTTACTTCCACACCCTCCTCTACACCAATTCCTGCTCTCTCACCAC
CTACCAAAGTACCAGAGCCAAATGAGAATGCTGGAGATGCTGTCCAGACCAAGCTTATTATGCTGGTTGA
TGATTTCTACTATGGACGGGATGGGGGCAAAGCAGCCCAGCTCACGAGCTTCCCTAAGGTTGCCACGTCT
TTCCGATGCCCTCATTGTACTAAGAGGCTAAAGAACAACATTCGATTCATGAACCACATGAAGCACCACG
TAGAACTTGATCAACAGAATGGTGAGGTGGATGGTCACACCATCTGCCAGCACTGTTACCGCCAGTTCTC
CACCCCTTTCCAGCTCCAGTGCCACTTGGAAAATGTTCATAGTCCCTATGAATCTACTACCAAGTGCAAG
ATCTGTGAGTGGGCCTTTGAAAGCGAGCCCTTGTTCCTCCAGCATATGAAGGACACCCACAAGCCTGGAG
AGATGCCTTATGTTTGTCAGGTGTGTCAGTATCGCTCCTCCCTCTACTCTGAAGTAGATGTCCATTTTCG
GATGATCCATGAAGATACTCGGCATTTGCTTTGCCCGTATTGCCTAAAAGTCTTCAAAAATGGCAATGCC
TTCCAGCAACACTACATGAGGCACCAGAAGAGAAATGTTTATCACTGCAACAAATGCCGGCTGCAGTTTC
TCTTTGCCAAGGACAAAATTGAACACAAGCTGCAGCACCATAAAACCTTCCGTAAGCCTAAGCAACTGGA
AGGCTTGAAACCAGGCACCAAGGTGACAATCCGGGCTTCCCGGGGGCAGCCGAGAACTGTTCCTGTGTCT
TCAAATGATGCACCTTCTGGCACCTTGCAGGAGGCAGCAGCGCTGACCTCCACTGACCCCCTACCTGTCT
TCCTTTATCCCCCTGTCCAGCGCAATATCCAGAAGAGAGCTGTTAGGAAAATGAGCGTCATGGGCCGGCA
GACATGTCTGGAGTGCAGCTTTGAGATTCCAGATTTTCCTAATCATTTCCCTACCTATGTGCATTGTTCT
CTCTGCCGATACAGCACCTGCTGCTCTAGAGCTTATGCCAATCACATGATCAACAATCATGTTCCACGGA
AAAGTCCCAAGTATTTGGCTTTGTTTAAAAATTCTGTAAGTGGAATCAAGCTGGCCTGCACTTCGTGTAC
CTTTGCTACCTCCGTGGGAGATGCGATGGCCAAGCATTTAGTGTTCAACCCCTCCCACAGATCTAGCAAC
ATCTTACCACGGGGGCTCAGTTGGATGTCTCACTTGAGGCCTGGCCAGGCTTCTGAACGAGTGTTCGACT
GGAGCATGAAGAATACATATCTTCCACCTCCCCTCGTCCCTAACAAAGCTGCCACTGTGAAGCCTGTAGG
AGTCACCCCAGCGGAGCCCCAAGAGCTGGCAGGTCCTGTGCTCCAGGCACTTCCATCCCCAGCCTCAACT
GCAACCCCACCAGCAACCCCCACTCACCCACAGCCCTCCGCCCTGCCACCCTCGGCCACAGAGGGGACTG
AGTGTCTGAATGTCAGTGAACAGGAAGAAGGAAGCCCTGTCACCCAGGATCCTGAGCCAGCATCAGGTGG
TGGAGGTGGCAGTGGGGTTGGCAAGAAAGAGCAGCTGTCTGTGAAGAAGCTTCGGGTAGTACTGTTTGCC
CTGTGCTGCAACACTGAACAGGCGGCTGAACACTTTCGAAACCCCCAGCGGCGAATCCGTCGTTGGCTTC
GACGCTTCCAGGCCTCTCAGGGAGAGAACTTAGAGGGCAAATATCTCAGCTTTGAGGCAGAAGAAAAACT
GGCTGAATGGGTGCTGATCCAGAGAGAGCAGCAGCTCCCTGTAAATGAGGAGACCTTGTTTCAGAAGGCC
ACCAAAATTGGACGCTCTTTGGAAGGGGGGTTTAAGATCTCCTATGAGTGGGCTGTGCGCTTCATGCTTC
GGCACCACCTCACTCCCCATGCCCGGCGAGCTGTCGCCCACACGTTACCGAAGCATGTAGCAGAAAATGC
TGGACTCTTCATTGAGTTTGTGCAGCGGCAGATTCACAATCAGGACTTACCTTTGTCTATGATTGTGGCT
ATTGATGAGATCTCTTTGTTCCTGGACACAGAGGTGCTGAGCAGTGATGACCGAAAGGAGAACGCTCTGC
AGACAGTGGGCACAGGGGAGCCTTGGTGTGACGTCGTGCTGGCTATCCTAGCAGATGGCACTGTCCTCCC
CACCCTTGTTTTCTTCCGAGGACAAGCGAATCGGTTCGCTAATGTGCCAGACTCTATATTACTAGAGGCC
AAAGACAGTGGCTACAGCGACGACGAAATCATGGAGCTTTGGTCAACCCGTGTATGGAAGAAGCACACAG
CTTGTCAGCACAGCAAAAGCATGTTGGTGATGGACTGTCATCGCACTCACTTGTCAGAAGAAGTACTGGC
CCTGCTCAGTGCCTCTAGCACTTTGCCTGCGGTAGTCCCCGCCGGTTGTAGCTCCAAAATCCAGCCACTA
GATGTATGCATCAAACGAACTGTTAAGAACTTCCTGCACAAAAAGTGGAAGGAACAGGCTCGGGAAATGG
CTGACGCTGCTTGTGATTCTGATGTCTTGCTTCAGCTGGTGTTGGTCTGGCTGGGAGAGGTGCTGGGTGT
CATTGGGGACTCCCCAGAGCTAGTTCAGCGGTCCTTCCTTGTGGCTAGTGTTCTGCCAGGTCCCGATGGC
AACGTTAACTCACCCACACGCAACGCTGACATGCAGGAGGAGCTCATTGCCTCCCTAGAGGAGCAGCTCA
AGCTAAATGGAGAACAGTCTGAGGAGCACTCAGCTTCTGCCCCCCGACCCAGGTCATCTCCTGAAGAGAC
AGTCGAGCCTGAAAGCCTTCACCAGCTTTTTGAGGGGGAAAGTGAGACGGAGTCTTTCTATGGCTTTGAG
GAAGCTGACCTTGATCTGATGGAGATCTAG

Translation (1409 aa):
MADTDLFMECEEEELEPWQKISDVIEDSVVEDYNSVDKTTSVSVSQQPVSAPVPIAAHASVAGHLSTSTT
VSNSGAQNSDSTKKTLVTLIANNNAGNTLVQQGGQPLILTQNPAPGLGTMVTQPVLRPVQVMQNANHVTS
SPVASQPIFITTQGFPVRNVRPVQNAMNQVGIVLNVQQGQTVRPITLVPAPGTQFVKPTVGVPQVFSQMT
PVRPGSTMPVRPTTNTFTTVIPATLTIRSTVPQSQSQQTKSTPSTSTTPTATQPTSLGQLAGQPPGQSNQ
TSNPKLAPSFPSPPAVSIASFVTVKRPGVTGENSNEVAKLVNTLNTVPSLGQSPGPVVVSNNSSAQRTSG
PESSVKVTSSIPVFDLQDGGRKICPRCNAQFRVTEALRGHMCYCCPEMVEYQKKGKSLDAEPSVPSAAKP
SSPEKTAPVTSTPSSTPIPALSPPTKVPEPNENAGDAVQTKLIMLVDDFYYGRDGGKAAQLTSFPKVATS
FRCPHCTKRLKNNIRFMNHMKHHVELDQQNGEVDGHTICQHCYRQFSTPFQLQCHLENVHSPYESTTKCK
ICEWAFESEPLFLQHMKDTHKPGEMPYVCQVCQYRSSLYSEVDVHFRMIHEDTRHLLCPYCLKVFKNGNA
FQQHYMRHQKRNVYHCNKCRLQFLFAKDKIEHKLQHHKTFRKPKQLEGLKPGTKVTIRASRGQPRTVPVS
SNDAPSGTLQEAAALTSTDPLPVFLYPPVQRNIQKRAVRKMSVMGRQTCLECSFEIPDFPNHFPTYVHCS
LCRYSTCCSRAYANHMINNHVPRKSPKYLALFKNSVSGIKLACTSCTFATSVGDAMAKHLVFNPSHRSSN
ILPRGLSWMSHLRPGQASERVFDWSMKNTYLPPPLVPNKAATVKPVGVTPAEPQELAGPVLQALPSPAST
ATPPATPTHPQPSALPPSATEGTECLNVSEQEEGSPVTQDPEPASGGGGGSGVGKKEQLSVKKLRVVLFA
LCCNTEQAAEHFRNPQRRIRRWLRRFQASQGENLEGKYLSFEAEEKLAEWVLIQREQQLPVNEETLFQKA
TKIGRSLEGGFKISYEWAVRFMLRHHLTPHARRAVAHTLPKHVAENAGLFIEFVQRQIHNQDLPLSMIVA
IDEISLFLDTEVLSSDDRKENALQTVGTGEPWCDVVLAILADGTVLPTLVFFRGQANRFANVPDSILLEA
KDSGYSDDEIMELWSTRVWKKHTACQHSKSMLVMDCHRTHLSEEVLALLSASSTLPAVVPAGCSSKIQPL
DVCIKRTVKNFLHKKWKEQAREMADAACDSDVLLQLVLVWLGEVLGVIGDSPELVQRSFLVASVLPGPDG
NVNSPTRNADMQEELIASLEEQLKLNGEQSEEHSASAPRPRSSPEETVEPESLHQLFEGESETESFYGFE
EADLDLMEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH