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Report for CCDS17674.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17674.1 Public Mus musculus 3 Wdr3 23 108 98 CCDS HistoryNCBI Gene:269470Re-query CCDS DB by CCDS ID:17674.1Re-query CCDS DB by GeneID:269470See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17674.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000052120.13 ENSMUSP00000060613.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000052120.13Link to Ensembl Protein Viewer:ENSMUSP00000060613.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000052120Re-query CCDS DB by Protein ID:ENSMUSP00000060613
Original member Current member NCBI NM_175552.5 NP_780761.1 Accepted alive Link to Nucleotide Sequence:NM_175552.5Link to Protein Sequence:NP_780761.1Re-query CCDS DB by Nucleotide ID:NM_175552Re-query CCDS DB by Protein ID:NP_780761Link to BLAST:NP_780761.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_780761.1 942 Q8BHB4 942 100% 0 0

Chromosomal Locations for CCDS 17674.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 100138687 100138842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100139059 100139152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100140179 100140307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100141555 100141598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100142213 100142260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100142453 100142545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100142955 100143020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100143403 100143453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100143693 100143827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100144319 100144430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100144559 100144659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100145635 100145691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100146432 100146567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100146701 100146786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100148105 100148206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100149867 100149960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100150963 100151193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100151908 100152012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100152807 100152904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100153546 100153647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100153862 100153975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100154923 100155018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100156380 100156458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100157324 100157442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100159766 100159975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100161020 100161190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2829 nt):
ATGGGGCTTACTAAACAGTATCTGCGCTATGTGGCTAGTGCTGTCTTTGGCTTGATTGGCAGCCAAAAAG
GTAACATTGTTTTTGTGACACTCCGTGGTGAGAAAGGACGCTATGTGGCAGTACCCGCCTGTGAACACGT
TTTTATCTGGGACTTAAGGAAAGGCGAGAAGATCCTTATCCTTCAGGGGAATAAACAAGAAGTCACTTGC
TTGTGTCCTTCCCCAGATGGGCTGCATCTAGCTGTTGGCTATGAGGATGGAGCCATCCGAATCTTCAGCC
TCCTCAGTGGTGAAGGAAACATAACCTTCAATGGACACAAAGCAGCTGTCACCAGCTTAAAGTACGATCA
GCTAGGAGGCAGGCTGGCTTCTGGGTCTAAGGATACAGATGTCATTATTTGGGATGTGATCAATGAAAGT
GGCCTCTACCGTCTAAAGGGACACAAGGATGCTGTCACACAAGCTTTGTTTCTCCGAGAAAGGAATCTGC
TGGTTACAAGTGGGAAAGACACTATGGTAAAGTGGTGGGACCTGGATAACCAGCACTGCTTCAAAACAAT
GGTTGGCCACCGAACTGAGGTGTGGGGCTTGGTTCTGGTTTCAGAAGAAAAGCGACTAATCACTGGGGCT
GCAGACAGTGAGCTGAGAGCCTGGGACATCGACTATCTGCAAGAGATTGATGACCCAGAAGAACCAGAGC
CCAAGAAAATCAAAGAGTGTCCTGGAATACAGGACACACCTGAATCAGAGGACAGCACCCTTGAGGCGGA
TGATGAAAAATCTGAAGATCGCATACTTTCGTGTAGTAAAGCTGGCTCCATAATGCGGGAAGGAAGGGAC
AGAGTTGTGAACCTCGCCGTGGACAAGACAGGCAGGATTCTTGCTTGCCACGGAACTGATTCTGTGTTAG
AAGTATTTTGTATTCTTTCCAAAGCAGAAGTTCAGAAGAAAATGGATAAGAAGCTAAAGAAAGCTAGAAA
GAAAGCAAGGTTGAACTCTGCCAATGAGGAGGAGGACCCTGAAACGAGTGTCTCGATGACACTGCAGGAC
GAGATCCTTCGAGTAGCCAAGATCAAGACTTCTGCCAAGATCAAATCTTTTGACCTGATTCACTCGCCTC
AAGGAGAGTTAAAGGCCGTCTTCTTGCTGCAGAACAATCTGGTGGAGTTGTATTCGCTCAATGCGTCCTT
GCCAGCCCCTCAGCCTGTGAGGACAAGCCGGATCACCATTGGAGGCCACCGCAGCGACGTGCGCACTTTG
TCCTTCAGCTCGGATAATATAGCTGTGCTTTCAGCAGCAGCCGATTCCATTAAGATCTGGAACAGGTCTA
CCCTGCAGTGTATCCGCACCATGCCTTGTGAATATGCTCTCTGCTCCTTCTTCGTTCCCGGCGATAGGCA
GGTGGTCATAGGAACAAAGACAGGAAATCTGCAACTTTACGACCTGGCCTCAGGCACTCTCTTGGAGACA
ATAGCTGCCCATGATGGAGCCCTGTGGTCCATGTCTCTTTCTCCAGATCAGCGTGGCTTTGTGACAGGTG
GCGCTGACAAAGCTGTCAAGTTCTGGGATTTTGAGTTGGTGACAGATAAAAATAGTACCCAGAAGAGACT
TTCTGTGAAGCAGACTCGAACCTTGCAGCTAGATGAGGACGTCCTGTGTGTCAGCTACTCTCCCAATCAA
AAGCTGCTGGCTGTGTCTTTGCTGGACTGCACTGTGAAGGTTTTCTATGTTGACACTTTAAAGTTTTTTC
TCTCACTGTATGGACACAAACTGCCTGTTTTATGCATGGACATCTCCCATGATGGAGCACTAATAGCAAC
TGGTTCTGCTGATAGAAATGTGAAAATCTGGGGTCTGGACTTTGGGGACTGCCACAGGTCTCTCTTTGCA
CATGATGACAGTGTGATGTATCTACGCTTTGTGCCTAAGTCTCACCTCTTCTTCACCGCTGGGAAGGACC
ACAAGATCAAGCAGTGGGATGCAGACAAGTTTGAGCACATCCAAACGCTGGAGGGACACCACCAGGAAAT
ATGGTGTTTGGCTGTCAGCCCCAGTGGAGACTACGTTGTATCAGCATCTCATGACAAGTCGCTGAGACTC
TGGGAGAGAACGAGAGAGCCTCTTATTCTCGAGGAAGAAAGGGAAATGCAAAGGGAAGCAGAGTATGAGG
AGAGCGTGGCCAAAGAAGACCAGCCGGCAGTTCCAGGGGAGACCCAAGGTGACAACTATTTCACTGGGAA
GAAGACAATTGAAACAGTCAAAGCGGCTGAGAGGATCATGGAGGCCATCGAGCTGCATCGAGAAGAAACT
GCAAAAATGAAAGAACACAGAGCCATTTGTAAAGCAGCGGGGAAAGAGGTTCCTCTTCCTGTCAACCCCA
TCCTGATGGCTCATGGCAATATTTCTCCTTCAGCGTATGTGTTAGAGACTTTTAAAGGGATCAGGTCAAG
TGAACTAGAAGAGGCCCTGCTTGTGCTGCCATTCTCCTATGTCCCAGACGTTCTTACACTGTTCAATGAA
TTCATCCAGACGGGCTTGGATGTCGAGCTCTTGTGCCGGTGCCTCTTTTTTCTCCTCAGGATTCACTTTG
GCCAGATCACCAGCAACCAGATGCTTGTGCCCGTGATAGAGAAACTAAAGGAAACAACTATTTCAAAAGT
CAGACAAGTCCAGGATGCCATTGGCTTCAATATGGCTGGTCTCGATTATCTCAAGAGAGAGTGTGAAGCA
AAGAGTGAAGTGATGTTTTTTGCAGAAGCTACTAGTCACTTGGAAGAGAAGAAGAAAAAACGAAAAAACA
GGAAAAGGATGATTTTAACACTGACTTAG

Translation (942 aa):
MGLTKQYLRYVASAVFGLIGSQKGNIVFVTLRGEKGRYVAVPACEHVFIWDLRKGEKILILQGNKQEVTC
LCPSPDGLHLAVGYEDGAIRIFSLLSGEGNITFNGHKAAVTSLKYDQLGGRLASGSKDTDVIIWDVINES
GLYRLKGHKDAVTQALFLRERNLLVTSGKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEEKRLITGA
ADSELRAWDIDYLQEIDDPEEPEPKKIKECPGIQDTPESEDSTLEADDEKSEDRILSCSKAGSIMREGRD
RVVNLAVDKTGRILACHGTDSVLEVFCILSKAEVQKKMDKKLKKARKKARLNSANEEEDPETSVSMTLQD
EILRVAKIKTSAKIKSFDLIHSPQGELKAVFLLQNNLVELYSLNASLPAPQPVRTSRITIGGHRSDVRTL
SFSSDNIAVLSAAADSIKIWNRSTLQCIRTMPCEYALCSFFVPGDRQVVIGTKTGNLQLYDLASGTLLET
IAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDFELVTDKNSTQKRLSVKQTRTLQLDEDVLCVSYSPNQ
KLLAVSLLDCTVKVFYVDTLKFFLSLYGHKLPVLCMDISHDGALIATGSADRNVKIWGLDFGDCHRSLFA
HDDSVMYLRFVPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRL
WERTREPLILEEEREMQREAEYEESVAKEDQPAVPGETQGDNYFTGKKTIETVKAAERIMEAIELHREET
AKMKEHRAICKAAGKEVPLPVNPILMAHGNISPSAYVLETFKGIRSSELEEALLVLPFSYVPDVLTLFNE
FIQTGLDVELLCRCLFFLLRIHFGQITSNQMLVPVIEKLKETTISKVRQVQDAIGFNMAGLDYLKRECEA
KSEVMFFAEATSHLEEKKKKRKNRKRMILTLT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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