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Report for CCDS18667.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18667.1 Public Mus musculus 4 Gja4 23 108 98 CCDS HistoryNCBI Gene:14612Re-query CCDS DB by CCDS ID:18667.1Re-query CCDS DB by GeneID:14612See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18667.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000053753.7 ENSMUSP00000062320.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000053753.7Link to Ensembl Protein Viewer:ENSMUSP00000062320.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000053753Re-query CCDS DB by Protein ID:ENSMUSP00000062320
Original member Current member NCBI NM_008120.3 NP_032146.1 Accepted alive Link to Nucleotide Sequence:NM_008120.3Link to Protein Sequence:NP_032146.1Re-query CCDS DB by Nucleotide ID:NM_008120Re-query CCDS DB by Protein ID:NP_032146Link to BLAST:NP_032146.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032146.1 333 P28235 333 100% 0 0

Chromosomal Locations for CCDS 18667.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 127311967 127312968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1002 nt):
ATGGGCGACTGGGGCTTCCTGGAGAAGTTGCTAGACCAGGTCCAGGAACACTCGACCGTGGTGGGCAAGA
TCTGGTTAACGGTGCTCTTCATCTTCCGCATCCTCATCCTGGGGCTGGCTGGCGAGTCGGTGTGGGGCGA
CGAGCAGTCTGATTTTGAGTGTAACACAGCCCAGCCGGGCTGCACCAACGTCTGCTATGACCAGGCCTTC
CCCATCTCCCACATCCGATACTGGGTGCTGCAGTTCCTCTTCGTCAGCACACCCACCCTGATCTACCTGG
GCCACGTCATCTACCTGTCTCGGCGGGAAGAGCGGTTGCGGCAGAAAGAGGGAGAGCTCCGGGCGCTGCC
ATCCAAGGACCTACATGTAGAGCGGGCACTGGCTGCCATCGAACATCAGATGGCCAAGATCTCGGTGGCA
GAGGACGGTCGTCTTCGGATTCGTGGGGCGCTCATGGGTACCTATGTGGTCAGCGTGCTGTGTAAGAGTG
TGCTGGAGGCAGGCTTCCTCTATGGCCAGTGGCGCCTCTATGGCTGGACCATGGAGCCGGTGTTTGTGTG
CCAGCGTGCGCCCTGCCCCCACATCGTGGACTGCTATGTCTCTCGACCCACTGAGAAGACTATCTTCATC
ATCTTCATGCTGGTGGTAGGAGTCATCTCCCTGGTGCTCAACCTGCTGGAGCTGGTTCACCTGCTGTGTC
GGTGTGTCAGCCGGGAGATAAAGGCACGAAGGGACCACGACGCCCGCCCGGCCCAGGGCAGTGCCTCAGA
CCCTTACCCTGAACAGGTTTTCTTCTACCTCCCCATGGGCGAGGGACCCTCTTCCCCACCGTGTCCCACC
TACAACGGGCTCTCATCCACTGAGCAGAACTGGGCCAACTTGACCACAGAGGAGAGACTGACCTCTTCCA
GACCTCCCCCATTTGTAAACACAGCTCCCCAGGGTGGCCGAAAGTCCCCTAGCCGCCCCAACAGCTCTGC
ATCCAAGAAGCAGTATGTGTAG

Translation (333 aa):
MGDWGFLEKLLDQVQEHSTVVGKIWLTVLFIFRILILGLAGESVWGDEQSDFECNTAQPGCTNVCYDQAF
PISHIRYWVLQFLFVSTPTLIYLGHVIYLSRREERLRQKEGELRALPSKDLHVERALAAIEHQMAKISVA
EDGRLRIRGALMGTYVVSVLCKSVLEAGFLYGQWRLYGWTMEPVFVCQRAPCPHIVDCYVSRPTEKTIFI
IFMLVVGVISLVLNLLELVHLLCRCVSREIKARRDHDARPAQGSASDPYPEQVFFYLPMGEGPSSPPCPT
YNGLSSTEQNWANLTTEERLTSSRPPPFVNTAPQGGRKSPSRPNSSASKKQYV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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