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Report for CCDS18886.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18886.1 Public Mus musculus 4 Tmem51 23 108 98 CCDS HistoryNCBI Gene:214359Re-query CCDS DB by CCDS ID:18886.1Re-query CCDS DB by GeneID:214359See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18886.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000036572.3 ENSMUSP00000042919.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000036572.3Link to Ensembl Protein Viewer:ENSMUSP00000042919.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000036572Re-query CCDS DB by Protein ID:ENSMUSP00000042919
Original member NCBI NM_145402.3 NP_663377.1 Updated not alive Link to Nucleotide Sequence:NM_145402.3Link to Protein Sequence:NP_663377.1Re-query CCDS DB by Nucleotide ID:NM_145402Re-query CCDS DB by Protein ID:NP_663377
Current member NCBI NM_145402.4 NP_663377.1 Accepted alive Link to Nucleotide Sequence:NM_145402.4Link to Protein Sequence:NP_663377.1Re-query CCDS DB by Nucleotide ID:NM_145402Re-query CCDS DB by Protein ID:NP_663377Link to BLAST:NP_663377.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663377.1 249 Q99LG1 249 100% 0 0

Chromosomal Locations for CCDS 18886.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 142031686 142032094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 142037405 142037745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (750 nt):
ATGATGGCCCAATCCAAAGCCAACGGCTCACACTACGCACTGACGGCCATCGGCCTGGGGATGCTGGTCC
TCGGGGTCATCATGGCCATGTGGAACCTGGTTCCTGGTTTCAGCCCTGCGGATAAGCCAACGTCTCAGGG
CAACAAGACAGAGGGAGGTGGTGGCATCCTCAAGAGCAAGACGTTTTCAGTGGCGTACGTGCTGGTCGGG
GCTGGCATGATGCTGCTGCTGCTAGCCATCTGCCTGAGCATCCGGGACAAAAGGAGGATGCGGCAGAGTG
AGGAGCTGGCTCGAATTCAGCAGCAGGCAGGAACCGTGCCCCACTCCCAAGAAGAAGACAGCCAGGAGGA
AGAGGAGGATGTCTCCTCACGGTACTACGTACCGAGCTACGAGGAAGTGATGAACACGGGCTACCCGGAA
ACCAGGGGGCAGGAGCAGAACCCAAGACTGAGCATTTCTCTCCCCTCCTATGAGTCGCTAACGGGGCTGG
ACGAGGCAACCCCCACCAGCACCAGGGCGGAGACAGAGACCAGCCCAGGGCATGCTCCGGACAGGCAAAA
CTCCAAGCTGGCCAAACGCCTGAAGCCACTCAAAGTTCGAAGGATTAAATCCGAAAAGCTTCACCTCAAA
GACTTCAGGATCACCCTACCGGACAAGAACGTTCCTCCTCCCTCTATCGAGCCTTTGACTCCTCCGCCCC
TGTACGATGAGGTCCAGGCAAAGGCGCCCGATGCCCGGCCACCCGACTGA

Translation (249 aa):
MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSPADKPTSQGNKTEGGGGILKSKTFSVAYVLVG
AGMMLLLLAICLSIRDKRRMRQSEELARIQQQAGTVPHSQEEDSQEEEEDVSSRYYVPSYEEVMNTGYPE
TRGQEQNPRLSISLPSYESLTGLDEATPTSTRAETETSPGHAPDRQNSKLAKRLKPLKVRRIKSEKLHLK
DFRITLPDKNVPPPSIEPLTPPPLYDEVQAKAPDARPPD


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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