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Report for CCDS19130.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19130.1 Public Mus musculus 5 Prkag2 23 108 98 CCDS HistoryNCBI Gene:108099Re-query CCDS DB by CCDS ID:19130.1Re-query CCDS DB by GeneID:108099See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19130.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000030784.13 ENSMUSP00000030784.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000030784.13Link to Ensembl Protein Viewer:ENSMUSP00000030784.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000030784Re-query CCDS DB by Protein ID:ENSMUSP00000030784
Original member Current member NCBI NM_145401.2 NP_663376.2 Accepted alive Link to Nucleotide Sequence:NM_145401.2Link to Protein Sequence:NP_663376.2Re-query CCDS DB by Nucleotide ID:NM_145401Re-query CCDS DB by Protein ID:NP_663376Link to BLAST:NP_663376.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663376.2 566 Q91WG5-1 566 100% 0 0

Chromosomal Locations for CCDS 19130.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 24863856 24863887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24866079 24866172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24869131 24869277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24871055 24871092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24871494 24871659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24873884 24874010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24875161 24875215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24876989 24877034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24878705 24878763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24880684 24880765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24889082 24889185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24908323 24908392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24947424 24947638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 25021792 25022071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 25028465 25028536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 25100011 25100124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1701 nt):
ATGGGAAGCGCAGCCATGGACACCAAGAAGAAGAAAGAGGTTTCCAGCCCGGGCGGGAGCAGTGGCAAAA
AGAACCCTAGCCTGAAGAGGCGGTCACTGCGAGTGCACATTCCGGACCTGAGTTCCTTTGCCATGCCGCT
CCTGGATGGAGATGTGGAGAATTCAGAAAAGCATTCATCTCGGAAGGTGGACAGTCCCTTCAGCTCAGGC
AGCCCCTCCAGAGGACTCTTCTCCAGAGGCCCCCAGCCCCGGCCCTCCAGCCCTGTGTCTGCTCCCGTGA
GGCCCAAGACGAGCCCTGGCTCTCCCAAAACTGTGTTCCCGTTCTCCTACCAGGAGTCCCCTCCACGCTC
TCCACGCCGGATGAGCTTCAGTGGGATCTTCCGCTCCTCATCCAAAGAGTCTTCGCCCAACTCCAACCCG
TCTACCTCTCCTGGGGGCATCCGGTTCTTCTCACGGTCCAGAAAAACCTCCAGCGTCTCCTCTTCTCCGT
CAACACCCACCCAAGTGACCAAGCAGCACCCATTTCCCCTGGAGTCCTACAAGCAGGAGCCTGAACGCCC
AGAGAGCCGCATCTATGCTTCCTCGTCCCCTCCAGACACTGGGCAGCGCTTCTGCCTGGCCTTTCAGAGC
CCAGCGCGACCTCCGCTGGCATCCCCGACATACCATGCTCCTTTGAGAACTGCGGTGCTGGCGGCGGCCC
CGGGACCCGCGGAAGCCGGCATGCTGGAGAAGCTGGAGTTCCAGGAGGAAGAAGACTCAGAAAGTGGCGT
TTATATGCGATTCATGAGGTCACACAAGTGTTATGACATCGTTCCAACCAGTTCAAAGCTTGTTGTCTTC
GACACTACGTTGCAAGTCAAAAAGGCCTTCTTTGCCTTGGTAGCCAACGGAGTCCGTGCAGCGCCGCTGT
GGGAAAGTAAAAAGCAGAGCTTTGTAGGAATGCTCACGATTACAGATTTCATAAATATCCTACACAGATA
CTATAAATCACCCATGGTACAGATTTATGAATTGGAAGAACATAAGATTGAAACGTGGAGGGAGTTGTAC
TTACAAGAAACCTTCAAGCCTTTGGTGAACATCTCTCCAGATGCGAGCCTCTTCGATGCTGTATACTCGT
TGATCAAAAATAAAATCCACAGATTGCCAGTTATTGACCCTATCAGTGGGAACGCACTTTATATACTTAC
CCACAAAAGAATCCTCAAGTTCCTCCAGCTTTTTATGTCTGACATGCCAAAGCCTGCCTTCATGAAGCAG
AACCTGGATGAGCTTGGAATCGGAACGTACCACAATATTGCCTTCATTCACCCAGACACTCCCATCATCA
AAGCCTTGAACATCTTCGTGGAGAGACGGATATCCGCATTGCCTGTGGTGGATGAGTCAGGAAAAGTTGT
AGATATTTATTCCAAGTTTGATGTAATTAATCTTGCTGCTGAGAAAACGTACAATAACTTGGACATCACA
GTGACCCAGGCCCTGCAGCACCGCTCGCAGTATTTTGAGGGTGTGGTGAAGTGCAGTAAGCTGGAAACAC
TGGAGACCATCGTGGACAGGATAGTGAGAGCCGAGGTCCATCGGCTGGTTGTAGTGAATGAAGCAGATAG
CATTGTGGGTATTATCTCCCTGTCAGACATCCTGCAAGCCCTGATCCTCACACCAGCAGGTGCCAAACAG
AAGGAGACAGAGACTGAATGA

Translation (566 aa):
MGSAAMDTKKKKEVSSPGGSSGKKNPSLKRRSLRVHIPDLSSFAMPLLDGDVENSEKHSSRKVDSPFSSG
SPSRGLFSRGPQPRPSSPVSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSNP
STSPGGIRFFSRSRKTSSVSSSPSTPTQVTKQHPFPLESYKQEPERPESRIYASSSPPDTGQRFCLAFQS
PARPPLASPTYHAPLRTAVLAAAPGPAEAGMLEKLEFQEEEDSESGVYMRFMRSHKCYDIVPTSSKLVVF
DTTLQVKKAFFALVANGVRAAPLWESKKQSFVGMLTITDFINILHRYYKSPMVQIYELEEHKIETWRELY
LQETFKPLVNISPDASLFDAVYSLIKNKIHRLPVIDPISGNALYILTHKRILKFLQLFMSDMPKPAFMKQ
NLDELGIGTYHNIAFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINLAAEKTYNNLDIT
VTQALQHRSQYFEGVVKCSKLETLETIVDRIVRAEVHRLVVVNEADSIVGIISLSDILQALILTPAGAKQ
KETETE


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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