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Report for CCDS19936.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19936.1 Public Mus musculus 6 Wnt16 23 108 98 CCDS HistoryNCBI Gene:93735Re-query CCDS DB by CCDS ID:19936.1Re-query CCDS DB by GeneID:93735See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19936.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000031681.9 ENSMUSP00000031681.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000031681.9Link to Ensembl Protein Viewer:ENSMUSP00000031681.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000031681Re-query CCDS DB by Protein ID:ENSMUSP00000031681
Original member Current member NCBI NM_053116.4 NP_444346.3 Accepted alive Link to Nucleotide Sequence:NM_053116.4Link to Protein Sequence:NP_444346.3Re-query CCDS DB by Nucleotide ID:NM_053116Re-query CCDS DB by Protein ID:NP_444346Link to BLAST:NP_444346.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_444346.3 364 Q9QYS1 364 100% 0 0

Chromosomal Locations for CCDS 19936.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 22288507 22288601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 22288781 22289028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 22290918 22291204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 22297767 22298231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1095 nt):
ATGGACAGAGCGGCGCTCCTGGCCCTGCCCAGCTTGTGTGCGCTGTGGGCAGCCGTGCTGTCGCTGCTCC
CCTGCGGAACCCAGGGCAACTGGATGTGGTTGGGCATCGCCTCTTTCGGGGTACCGGAGAAGCTGGGCTG
CGCCGACTTGCCGCTGAACAGCCGCCAGAAGGAGCTGTGCAAGAGGAAACCGTACCTGCTGCCTAGCATC
CGCGAGGGCGCCAGGCTGGGCATTCAGGAGTGCAGAAGCCAGTTCCGACACGAGAGGTGGAACTGTATGG
TCGCCACTACCACTTCCACCCAGCTCGCCACAGCCCCCCTCTTTGGCTATGAGCTGAGTAGCGGCACCAA
GGAGACAGCATTCATTTATGCCATCATGGCAGCGGGCCTGGTGCACTCTGTCACCAGGTCATGCAGTGCA
GGCAACATGACCGAATGTTCCTGTGACACCACCTTGCAGAATGGTGGCTCACCAAGTGAAGGCTGGCACT
GGGGAGGATGCTCGGATGATGTCCAGTACGGCATGTGGTTCAGCAGAAAGTTTCTAGATCTTCCCATCAG
AAACACCACAGGAAAAGAAAGCAGAGTCCTGCTAGCCATGAATCTACACAACAACGAAGCGGGGCGGCAG
GCTGTCGCCAAGTTAATGTCTGTGGACTGCCGCTGCCACGGAGTTTCCGGCTCCTGTGCTGTGAAAACCT
GCTGGAAAACTATGTCTTCTTTTGAAAAGATTGGGCATTTTTTAAAGGATAAATATGAAAACAGCATCCA
GATCTCAGACAAAACCAAGAGGAAAATGCGCAGGAGAGAAAAAGACCAGAGGCAGACCCCCATTCTCAAG
GATGACTTGCTGTACGTTCATAAGTCTCCCAACTACTGCGTGGAGAACAAGAAACTGGGGATTCCTGGGA
CCCAGGGCAGAGAGTGCAACCGGACATCAGGAGGCGCAGATGGCTGTAACCTCCTCTGCTGTGGCCGAGG
CTACAACACCCATGTAGTCAGGCACGTGGAGAGGTGTGAGTGTAAGTTTATCTGGTGCTGCTACGTCCGC
TGCAGGAGGTGTGAAAGTATGACCGATGTCCACACGTGTAAGTAA

Translation (364 aa):
MDRAALLALPSLCALWAAVLSLLPCGTQGNWMWLGIASFGVPEKLGCADLPLNSRQKELCKRKPYLLPSI
REGARLGIQECRSQFRHERWNCMVATTTSTQLATAPLFGYELSSGTKETAFIYAIMAAGLVHSVTRSCSA
GNMTECSCDTTLQNGGSPSEGWHWGGCSDDVQYGMWFSRKFLDLPIRNTTGKESRVLLAMNLHNNEAGRQ
AVAKLMSVDCRCHGVSGSCAVKTCWKTMSSFEKIGHFLKDKYENSIQISDKTKRKMRRREKDQRQTPILK
DDLLYVHKSPNYCVENKKLGIPGTQGRECNRTSGGADGCNLLCCGRGYNTHVVRHVERCECKFIWCCYVR
CRRCESMTDVHTCK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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