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Report for CCDS20039.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20039.1 Public Mus musculus 6 Moxd2 23 108 98 CCDS HistoryNCBI Gene:194357Re-query CCDS DB by CCDS ID:20039.1Re-query CCDS DB by GeneID:194357See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 20039.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000031937.3 ENSMUSP00000031937.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000031937.3Link to Ensembl Protein Viewer:ENSMUSP00000031937.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000031937Re-query CCDS DB by Protein ID:ENSMUSP00000031937
Original member Current member NCBI NM_139296.2 NP_647457.2 Accepted alive Link to Nucleotide Sequence:NM_139296.2Link to Protein Sequence:NP_647457.2Re-query CCDS DB by Nucleotide ID:NM_139296Re-query CCDS DB by Protein ID:NP_647457Link to BLAST:NP_647457.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_647457.2 619 Q7TT41 619 100% 0 0

Chromosomal Locations for CCDS 20039.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 40878794 40879036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 40879320 40879437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 40880326 40880456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 40881920 40881979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 40882119 40882215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 40882455 40882546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 40883390 40883556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 40883730 40883832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 40884007 40884174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 40884956 40885039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 40885287 40885448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 40885936 40886082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 40887207 40887494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1860 nt):
ATGGCCTGTGTTCTACTCTTCAGACTTTTCTTACTTTTGGTCCTGGCAGCCTTTTCTCAAGGCAAGCGCC
TGGGTCCTACATCTCCCCTTCGTTATTCCAGGTTCCTAGATCCTTCCCGTGCTGTTTTCCTGCGCTGGGA
CTTTGACTATGAGGCTGAGATAATCACATTTGAGCTCCAAGTCCAAACAACTGGCTGGGTTGGCCTGGGC
ATCACAGACCGGTACACCTTTGTGGGAAGTGATCTGGTAGTTGGAGGAGTCCTACCCAATGGCAATGTCT
ACTTTTCGGATCAGCACCTTCTGGATGAAGACACTCTAGAACAGGATGGGAGCCAGGATGCTGAACTCCT
AAGGCTCACAGAAGATGCTGTCTCGACCACCATGCGCTTTTCCAGGCCTTTCAGAACCTGTGATCCACAT
GATCGTGACATTACGAGTGATACCATGAGGGTCCTGGCTGCCTATGGCCCGGATGACATACCAAAGATGA
GTCGGGAGCATACTTTTGTCAAGTCCATCTTCTTGCTTCAAATGCTACAATATGATGATCAAGATGCCCC
TGAAGACACCATCATCCATGACTTGAAGATCAGTAATTTCATCATTCCAGAGGATGATACCACATATGCC
TGTACCTTTCTCCCACTCCCTATTGTCAGCAAAAAGCATCACATCTACAAGTTTGAACCTATATTGGTGG
AACGCAATGAGACGATGGTGCATCACGTTCTCGTGTATGCATGTGGCAATTCTAGTGTGCTCCCCACAGG
CATCGGCGAATGCTATGGATCAGACCCTGCCTTCTCTCTCTGCTCCCACGTCATCGCGGGCTGGGCTGTC
GGGGGCCTTAGTTACCAGTTTCCAGATGATGTGGGCATCTCTATTGGAACCCCCTTTGACCCTCAGTGGA
TCAGACTGGAAATTCACTACAGCAATTTTCAGAACCTTCCTGGTATCCGTGATACCTCAGGGATGCGGCT
GTTCTACACCTCGCACCTTCGCAAATATGACATGGGAGTCCTCCAGCTGGGCATCTCAGTTTTCCCTATT
CACTTTATACCCCCGGGTGCAGAGGCTTTCTTGTCCTATGGACTATGCAAAACAGACAAGTTTGAAGAGC
TGAATGGGGCTCCAGTATCTGACATATATATATCAGCCTGCCTGCTCCACACCCACTTAGCTGGGCGGTC
ACTGCAAGCTCTGCAATACAGAAATGGAACCCAACTCCAAGTAGTATGTAAAGATTTTTCCTATGATTTC
AATCTGCAAGAGTCTCGGGACTTACCTCATCCTGTGGTGATTAAGCCGGGGGATGAACTGCTGATAGAAT
GTCATTACCAGACACTGGATCGTGACTTCATGACTTTTGGAGGTGCCAGCACCATTAATGAGATGTGCCT
CATCTTCTTCTTCTACTATCCCAGAATTAACATCTCCAGTTGCATGGGATACCCTGATATCATCTATGTG
ACCAATGAGCTGGGGGAAGAAGCATCAGAGAATCCCATGGAGAACCTGATGGTCCTGGATAATGTGGAGT
GGACTCCAGAGAACATTAAGAAAGCTGAGAAAGCCTGCAAGGAGTCCCAGCAGACAGTATTGATCAAGAC
CATTGATGAAGAAGTAGAAAATACAACAGGTTGGATTCCTGATATTATACCAACTCCTCGAGGACCATGC
TTAGAGTCTACTGGAGGCAAGGTGGAACCTCAGGACAATACCCCGGCAGGCTTCAGGGCTGTACCACTGG
CCCTCTCTGGCTCCAATACTGCTACTCTGAGGCCCCTGCCCATGATTGCTGTACTGTTCCTGCAGGGTAG
CCTCTCGTGTCTCCTTGCAATGCTGCAGACTGGAGTATGA

Translation (619 aa):
MACVLLFRLFLLLVLAAFSQGKRLGPTSPLRYSRFLDPSRAVFLRWDFDYEAEIITFELQVQTTGWVGLG
ITDRYTFVGSDLVVGGVLPNGNVYFSDQHLLDEDTLEQDGSQDAELLRLTEDAVSTTMRFSRPFRTCDPH
DRDITSDTMRVLAAYGPDDIPKMSREHTFVKSIFLLQMLQYDDQDAPEDTIIHDLKISNFIIPEDDTTYA
CTFLPLPIVSKKHHIYKFEPILVERNETMVHHVLVYACGNSSVLPTGIGECYGSDPAFSLCSHVIAGWAV
GGLSYQFPDDVGISIGTPFDPQWIRLEIHYSNFQNLPGIRDTSGMRLFYTSHLRKYDMGVLQLGISVFPI
HFIPPGAEAFLSYGLCKTDKFEELNGAPVSDIYISACLLHTHLAGRSLQALQYRNGTQLQVVCKDFSYDF
NLQESRDLPHPVVIKPGDELLIECHYQTLDRDFMTFGGASTINEMCLIFFFYYPRINISSCMGYPDIIYV
TNELGEEASENPMENLMVLDNVEWTPENIKKAEKACKESQQTVLIKTIDEEVENTTGWIPDIIPTPRGPC
LESTGGKVEPQDNTPAGFRAVPLALSGSNTATLRPLPMIAVLFLQGSLSCLLAMLQTGV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
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