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Report for CCDS20344.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
20344.1 |
Public |
Mus musculus |
6 |
Plxna1 |
23 |
108 |
98 |
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Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana)
Attributes |
CDS uses downstream AUG |
Sequence IDs included in CCDS 20344.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000049845.5 |
ENSMUSP00000063066.5 |
Accepted |
alive |
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EBI |
ENSMUST00000163139.7 |
ENSMUSP00000131840.1 |
Accepted |
alive |
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NCBI |
NM_008881.2 |
NP_032907.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_032907.1 |
1894 |
P70206 |
1894 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 20344.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (5685 nt): ATGCCACTGCCACCTCTGAGCTCTCGGACACTGCTGCTGCTGCTCTTGCTGCTGCTGAGGGGTGTGTGGA TAGCCATCAGCTCGCCCCCAGCTGGTTTGGGTCCACAACCTGCCTTCCGCACCTTTGTGGCCAGTGACTG GGGCCTCACTCACCTGGTGGTTCACGAACAGACAGGAGAGGTATATGTTGGCGCTGTGAACCGTATTTAC AAGCTGTCGGGGAACCTAACCCTGCTTCGGGCCCATGTGACAGGCCCTGTAGAAGACAATGAGAAATGCT ACCCACCCCCCAGTGTACAGTCCTGCCCACATGGTCTGGGCAGCACAGACAACGTCAACAAGCTTCTACT GCTGGACTATGCAGCCAACCGCCTGTTGGCCTGTGGCAGTGCCTCACAGGGCATCTGCCAGTTCCTGAGG TTGGACGATCTCTTCAAGCTGGGCGAGCCGCACCACCGCAAGGAACACTACCTGTCCAGTGTTCGAGAGG CTGGCAGCATGGCGGGAGTGCTCATTGCTGGGCCACCCGGCCAGGGCCAGGCCAAGCTCTTCGTGGGCAC ACCCATCGATGGCAAATCAGAATACTTCCCCACTCTGTCCAGTCGCCGGCTCATGGCCAACGAGGAAGAT GCTGACATGTTTGGCTTTGTGTACCAGGATGAGTTTGTGTCATCTCAGCTCAAGATCCCTTCAGACACAT TGTCCAAGTTCCCAGCCTTTGACATCTACTATGTGTACAGTTTCCGCAGCGAGCAGTTCGTATACTACCT CACCCTGCAGCTAGACACGCAGCTTACCTCGCCCGACGCCGCTGGCGAGCACTTCTTCACCTCCAAGATT GTGCGGCTGTGCGTGAATGACCCCAAGTTCTACTCTTACGTGGAGTTCCCCATTGGCTGCGAGCAGGCTG GCGTGGAGTATCGGCTGGTGCAGGACGCCTACCTGAGCCGGCCGGGACAGGCCCTGGCCAAACAGCTGGG CCTGGCTGAGGATGAGGAGGTGTTGTTCACTGTGTTCGCACAGGGCCAGAAGAACCGCGTGAAGCCACCC AAGGAGTCGGCGCTGTGCCTGTTCACACTGAGGGCCATCAAGGAGAAAATCAAGGAGCGCATCCAATCCT GCTACCGTGGAGAAGGAAAGCTCTCCCTGCCTTGGCTGCTCAACAAGGAGCTGGGCTGCATCAACTCGCC CCTGCAGATTGATGACGACTTCTGCGGGCAGGATTTCAACCAGCCACTGGGTGGCACGGTCACCATCGAG GGCACACCCCTTTTTGTCGACAAGGAAGATGGCCTGACTGCTGTGGCTGCCTATGACTACCAAGGCCGCA CCGTGGTTTTTGCTGGCACTCGCAGCGGCCGCATCCGCAAGATTCTGGTGGACCTTGCAAACCCCAGCGG CAGGCCGGCCCTGGCTTATGAAAGTGTGGTGGCTCAGGAGGGCAACCCTATCCTGCGTGACCTGGTCCTC AGCCCCAACCGCCAGTACCTCTATGCTATGACGGAGAAGCAGGTGACGCAGGTGCCTGTGGAAAGCTGTG TCCAGTATACTTCCTGTGAGCTGTGCCTGGGGTCTCGGGACCCCCACTGTGGCTGGTGTGTCCTGCACAG CATCTGCTCTAGGCAGGATGCCTGTGAGCGGGCAGAAGAGCCCCAGCGTTTTGCCTCTGACCTGCTGCAG TGTGTGCAGTTAACTGTCCAGCCGCGCAATGTGTCAGTCACCATGTCCCAGGTGCCGCTCGTGCTGCAGG CTTGGAATGTGCCTGACCTCTCAGCTGGTGTCAACTGCTCCTTTGAGGACTTCACGGAGACTGAGAGCAT CCTGGAAGATGGCCGCATCCATTGCCACTCACCTTCTGCCCGGGAAGTGGCGCCCATCACACAGGGTCAG GGAGACCAGCGGGTGGTGAAGCTCTACCTCAAGTCCAAGGAGACAGGGAAGAAGTTTGCATCTGTGGACT TTGTCTTCTATAACTGCAGTGTTCACCAGTCCTGCCTGGCATGTGTCAACGGCTCCTTCCCCTGCCATTG GTGCAAATACCGCCATGTTTGCACCAACAATGCGGCTGACTGCGCCTTTCTGGAAGGCCGAGTCAACATG TCTGAGGACTGCCCACAGATCCTGCCTTCTACCCACATCTATGTGCCAGTGGGTGTGGTGAAGCCCATCA CCCTGGCTGCACGGAACCTGCCGCAGCCACAGTCGGGTCAGCGAGGGTACGAGTGCCTTTTCCACATCCC AGGCAGCCCGGCCCGAGTCACTGCACTGCGCTTCAACAGCTCCAGCCTGCAGTGCCAGAACTCCTCGTAC TCCTATGAGGGGAATGATGTCAGCGATCTGCCTGTGAACCTGTCGGTTGTGTGGAATGGCAACTTTGTCA TTGACAACCCCCAGAACATCCAGGCCCACCTCTACAAGTGCCCAGCCTTGCGCCAGAGTTGTGGCCTCTG CCTCAAGGCAGACCCACGCTTTGAGTGCGGCTGGTGCGTAGCTGAGCGCCGCTGTTCCCTTCGTCACCAC TGCCCAGCTGACTCACCAGCCTCCTGGATGCATGCCCACCATGGCAGCAGCCGCTGCACAGACCCCAAGA TTCTCAAGCTGTCCCCAGAGACAGGCCCTCGGCAGGGAGGGACTCGACTAACCATCACCGGTGAGAATCT GGGCCTCCGGTTTGAGGATGTGCGGCTAGGCGTGCACGTGGGCAAGGTGCTTTGCAGCCCTGTGGAGAGC GAGTACATCAGCGCAGAACAGATTGTCTGCGAGATTGGAGATGCCAGCACGCTGCGGGCCCATGATGCCC TGGTGGAGGTGTGTGTGCGGGACTGCTCCCTCCACTACCGAGCGCTGTCCCCTAAACGCTTCACTTTTGT GACACCGACCTTCTACCGTGTGAGCCCCTCCCGTGGGCCTCTGTCTGGAGGTACCTGGATTGGCATCGAA GGGAGCCATCTGAATGCTGGCAGTGATGTAGCTGTGTCCATTGGCGGTCGGCCCTGCTCCTTCTCCTGGA GAAACTCACGAGAGATCCGCTGCCTGACACCGCCCGGGCACACTCCTGGCAGCGCCCCTATTGTTATCAA CATCAATCGTGCCCAGCTCTCCAACCCCGAGGTGAAGTACAACTATACTGAAGACCCTACTATCCTGAGG ATCGACCCTGAGTGGAGCATCAATAGTGGTGGGACCCTCCTAACAGTCACGGGCACCAACCTGGCCACTG TCCGTGAACCTCGAATCCGCGCCAAGTATGGAGGCATTGAGAGGGAAAATAGCTGCATGGTGTACAATGA CACCACCATGGTGTGCCGGGCGCCGTCTATAGACAACCCAAAGCGCAGCCCGCCAGAACTGGGAGAGCGG CCAGATGAGATTGGTTTCATCATGGACAATGTGCGCACGCTGCTGGTACTCAACAGCTCCTCCTTCCTCT ACTACCCGGACCCTGTACTGGAGCCACTTAGCCCTACTGGGCTCTTGGAGCTGAAGCCCAGCTCCCCGCT CATCCTCAAGGGGCGGAATCTCCTGCCACCTGCTCCTGGCAATTCCCGGCTCAACTACACGGTGCTCATC GGCTCCACACCTTGTATCCTCACCGTGTCTGAGACACAGCTGCTGTGTGAAGCACCCAACCTCACGGGGC AGCACAAAGTCACGGTGCGGGCCGGGGGCTTCGAGTTCTCACCTGGGATGCTGCAGGTGTATTCGGACAG CCTGCTGACACTGCCGGCCATTGTGGGTATCGGTGGTGGGGGTGGCCTCTTGCTGCTGGTCATCGTGGCT GTGCTCATCGCCTACAAACGCAAATCCCGGGATGCTGACCGTACCCTCAAGCGGCTGCAGCTCCAGATGG ACAACCTGGAGTCACGGGTGGCCCTCGAGTGCAAGGAAGCTTTTGCAGAGCTACAGACGGACATCCATGA GCTGACCAGTGACCTGGATGGTGCTGGCATCCCCTTCCTTGACTACCGCACATATGCCATGCGAGTGCTG TTTCCTGGGATTGAGGACCATCCTGTACTGAAGGAGATGGAGGTGCAGGCCAATGTGGAGAAGTCGCTGA CACTGTTCGGACAGCTGTTGACCAAGAAGCATTTCCTGCTAACCTTCATCCGCACACTAGAGGCCCAGCG TAGCTTCTCCATGCGTGACCGTGGGAACGTGGCCTCACTCATCATGACAGCCCTGCAGGGTGAGATGGAG TATGCCACAGGAGTGCTAAAGCAGTTGCTGTCTGACCTCATCGAGAAAAACCTAGAAAGCAAGAACCACC CCAAGCTCCTGTTACGGAGGACCGAATCAGTGGCAGAGAAGATGTTGACCAACTGGTTCACCTTCCTTTT GTATAAGTTCCTCAAGGAGTGTGCTGGGGAGCCGCTCTTTATGCTGTACTGTGCCATCAAGCAGCAGATG GAGAAGGGCCCTATTGACGCCATCACAGGGGAGGCCCGCTACTCTCTGAGCGAAGACAAGCTCATTCGGC AGCAGATTGACTACAAGACCCTGACCCTGAACTGCGTGAACCCTGAACATGAGAATGCGCCCGAGGTTCC TGTGAAGGGGCTGAACTGTGACACCGTGACCCAGGTCAAGGAGAAGCTCCTGGATGCTGTGTACAAGGGT GTGCCTTACTCACAGCGGCCGAAGGCCGGGGACATGGACCTGGAGTGGCGCCAGGGTCGCATGGCACGCA TCATCCTTCAGGACGAGGACGTCACCACTAAAATTGACAATGACTGGAAGAGGCTGAACACACTAGCTCA CTATCAGGTGACGGATGGGTCATCGGTGGCACTAGTACCCAAGCAGACATCGGCCTACAACATCTCCAAC TCCTCTACCTTCACTAAGTCCCTCAGCAGATACGAGAGCATGCTGCGTACAGCCAGTAGCCCCGACAGCC TACGCTCACGAACACCCATGATCACGCCAGACCTGGAAAGTGGAACAAAACTGTGGCACCTGGTGAAGAA CCACGACCACCTGGACCAACGTGAAGGCGACCGTGGCAGCAAGATGGTCTCTGAGATCTACCTAACCAGG CTGCTGGCCACCAAGGGAACACTACAAAAGTTCGTGGATGACCTGTTCGAGACCATCTTCAGCACGGCGC ACCGTGGCTCAGCCCTACCTCTGGCCATCAAGTACATGTTTGACTTCTTAGATGAGCAGGCCGACAAGCA TCAGATCCACGACTCAGATGTGCGCCATACCTGGAAGAGCAATTGCCTGCCTCTGCGCTTCTGGGTGAAT GTGATTAAGAACCCTCAGTTCGTGTTCGACATCCACAAGAACAGCATAACAGATGCCTGCCTCTCAGTGG TAGCGCAGACCTTCATGGACTCCTGCTCTACATCAGAGCACAAGCTGGGCAAAGACTCACCCTCCAACAA GTTGCTCTATGCCAAGGACATCCCCAACTACAAGAGCTGGGTTGAAAGGTACTATGCTGACATTGCCAAG ATGCCTGCAATCAGTGACCAAGACATGAGCGCCTACCTGGCAGAGCAGTCCCGGCTGCATCTCAGCCAGT TCAACAGCATGAGTGCCCTGCACGAGATCTACTCCTACATCGCCAAGTACAAGGACGAGATTCTGGTGGC TCTGGAGAAAGATGAACAGGCTCGAAGGCAGCGGCTTCGAAGCAAACTGGAGCAGGTGGTGGACACAATG GCCCTGAGCAGCTGA
Translation (1894 aa): MPLPPLSSRTLLLLLLLLLRGVWIAISSPPAGLGPQPAFRTFVASDWGLTHLVVHEQTGEVYVGAVNRIY KLSGNLTLLRAHVTGPVEDNEKCYPPPSVQSCPHGLGSTDNVNKLLLLDYAANRLLACGSASQGICQFLR LDDLFKLGEPHHRKEHYLSSVREAGSMAGVLIAGPPGQGQAKLFVGTPIDGKSEYFPTLSSRRLMANEED ADMFGFVYQDEFVSSQLKIPSDTLSKFPAFDIYYVYSFRSEQFVYYLTLQLDTQLTSPDAAGEHFFTSKI VRLCVNDPKFYSYVEFPIGCEQAGVEYRLVQDAYLSRPGQALAKQLGLAEDEEVLFTVFAQGQKNRVKPP KESALCLFTLRAIKEKIKERIQSCYRGEGKLSLPWLLNKELGCINSPLQIDDDFCGQDFNQPLGGTVTIE GTPLFVDKEDGLTAVAAYDYQGRTVVFAGTRSGRIRKILVDLANPSGRPALAYESVVAQEGNPILRDLVL SPNRQYLYAMTEKQVTQVPVESCVQYTSCELCLGSRDPHCGWCVLHSICSRQDACERAEEPQRFASDLLQ CVQLTVQPRNVSVTMSQVPLVLQAWNVPDLSAGVNCSFEDFTETESILEDGRIHCHSPSAREVAPITQGQ GDQRVVKLYLKSKETGKKFASVDFVFYNCSVHQSCLACVNGSFPCHWCKYRHVCTNNAADCAFLEGRVNM SEDCPQILPSTHIYVPVGVVKPITLAARNLPQPQSGQRGYECLFHIPGSPARVTALRFNSSSLQCQNSSY SYEGNDVSDLPVNLSVVWNGNFVIDNPQNIQAHLYKCPALRQSCGLCLKADPRFECGWCVAERRCSLRHH CPADSPASWMHAHHGSSRCTDPKILKLSPETGPRQGGTRLTITGENLGLRFEDVRLGVHVGKVLCSPVES EYISAEQIVCEIGDASTLRAHDALVEVCVRDCSLHYRALSPKRFTFVTPTFYRVSPSRGPLSGGTWIGIE GSHLNAGSDVAVSIGGRPCSFSWRNSREIRCLTPPGHTPGSAPIVININRAQLSNPEVKYNYTEDPTILR IDPEWSINSGGTLLTVTGTNLATVREPRIRAKYGGIERENSCMVYNDTTMVCRAPSIDNPKRSPPELGER PDEIGFIMDNVRTLLVLNSSSFLYYPDPVLEPLSPTGLLELKPSSPLILKGRNLLPPAPGNSRLNYTVLI GSTPCILTVSETQLLCEAPNLTGQHKVTVRAGGFEFSPGMLQVYSDSLLTLPAIVGIGGGGGLLLLVIVA VLIAYKRKSRDADRTLKRLQLQMDNLESRVALECKEAFAELQTDIHELTSDLDGAGIPFLDYRTYAMRVL FPGIEDHPVLKEMEVQANVEKSLTLFGQLLTKKHFLLTFIRTLEAQRSFSMRDRGNVASLIMTALQGEME YATGVLKQLLSDLIEKNLESKNHPKLLLRRTESVAEKMLTNWFTFLLYKFLKECAGEPLFMLYCAIKQQM EKGPIDAITGEARYSLSEDKLIRQQIDYKTLTLNCVNPEHENAPEVPVKGLNCDTVTQVKEKLLDAVYKG VPYSQRPKAGDMDLEWRQGRMARIILQDEDVTTKIDNDWKRLNTLAHYQVTDGSSVALVPKQTSAYNISN SSTFTKSLSRYESMLRTASSPDSLRSRTPMITPDLESGTKLWHLVKNHDHLDQREGDRGSKMVSEIYLTR LLATKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDEQADKHQIHDSDVRHTWKSNCLPLRFWVN VIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTSEHKLGKDSPSNKLLYAKDIPNYKSWVERYYADIAK MPAISDQDMSAYLAEQSRLHLSQFNSMSALHEIYSYIAKYKDEILVALEKDEQARRQRLRSKLEQVVDTM ALSS
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