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Report for CCDS20832.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20832.1 Public Mus musculus 7 Bsph1 23 108 98 CCDS HistoryNCBI Gene:330470Re-query CCDS DB by CCDS ID:20832.1Re-query CCDS DB by GeneID:330470See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20832.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098811.3 ENSMUSP00000096408.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098811.3Link to Ensembl Protein Viewer:ENSMUSP00000096408.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000098811Re-query CCDS DB by Protein ID:ENSMUSP00000096408
Original member Current member NCBI NM_001033418.4 NP_001028590.1 Accepted alive Link to Nucleotide Sequence:NM_001033418.4Link to Protein Sequence:NP_001028590.1Re-query CCDS DB by Nucleotide ID:NM_001033418Re-query CCDS DB by Protein ID:NP_001028590Link to BLAST:NP_001028590.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028590.1 133 Q3UW26 133 100% 0 0

Chromosomal Locations for CCDS 20832.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 13450914 13450986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 13458255 13458275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 13470299 13470328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 13472136 13472267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 13472957 13473102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (402 nt):
ATGGCCCAGCCTTTGGATTTTCTATTGGTTTCAATCTGCCTGTTTCACAGCCTTTTCAGTTTTCAAGTAG
AAGATTATTATGCACCAACTATAGAGTCTTTAATTAGAAATCCAGAGACAGAAGATGGTGCATGTGTCTT
TCCGTTCTTGTATAGAAGTGAAATATTCTATGACTGTGTCAATTTCAATCTGAAACACAAGTGGTGTTCT
TTGAACAAGACTTACCAAGGTTACTGGAAATACTGTGCTCTTTCAGACTATGCTCCATGTGCCTTTCCCT
TCTGGTACAGACATATGATCTACTGGGATTGCACAGAGGATGGAGAGGTGTTTGGGAAAAAGTGGTGTTC
ACTCACCCCAAATTACAACAAAGACCAAGTTTGGAAATATTGTATAGAGTGA

Translation (133 aa):
MAQPLDFLLVSICLFHSLFSFQVEDYYAPTIESLIRNPETEDGACVFPFLYRSEIFYDCVNFNLKHKWCS
LNKTYQGYWKYCALSDYAPCAFPFWYRHMIYWDCTEDGEVFGKKWCSLTPNYNKDQVWKYCIE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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