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Report for CCDS20907.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20907.1 Public Mus musculus 7 Gemin7 23 108 98 CCDS HistoryNCBI Gene:69731Re-query CCDS DB by CCDS ID:20907.1Re-query CCDS DB by GeneID:69731See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 20907.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000051364.3 ENSMUSP00000055844.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000051364.3Link to Ensembl Protein Viewer:ENSMUSP00000055844.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000051364Re-query CCDS DB by Protein ID:ENSMUSP00000055844
Original member Current member EBI ENSMUST00000119912.1 ENSMUSP00000112742.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000119912.1Link to Ensembl Protein Viewer:ENSMUSP00000112742.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000119912Re-query CCDS DB by Protein ID:ENSMUSP00000112742
Original member Current member EBI ENSMUST00000117222.1 ENSMUSP00000113266.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000117222.1Link to Ensembl Protein Viewer:ENSMUSP00000113266.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000117222Re-query CCDS DB by Protein ID:ENSMUSP00000113266
Original member Current member EBI ENSMUST00000122055.1 ENSMUSP00000113583.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000122055.1Link to Ensembl Protein Viewer:ENSMUSP00000113583.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000122055Re-query CCDS DB by Protein ID:ENSMUSP00000113583
Original member Current member EBI ENSMUST00000122127.1 ENSMUSP00000113709.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000122127.1Link to Ensembl Protein Viewer:ENSMUSP00000113709.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000122127Re-query CCDS DB by Protein ID:ENSMUSP00000113709
Original member Current member NCBI NM_027189.2 NP_081465.1 Accepted alive Link to Nucleotide Sequence:NM_027189.2Link to Protein Sequence:NP_081465.1Re-query CCDS DB by Nucleotide ID:NM_027189Re-query CCDS DB by Protein ID:NP_081465Link to BLAST:NP_081465.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081465.1 129 Q9CWY4 129 100% 0 0

Chromosomal Locations for CCDS 20907.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 19565279 19565668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (390 nt):
ATGCAGAGCCCACTGACCATTCCTGTGCCGGTGCCAGTGCTGCGCCTCCCTCGGGGCCCCGATGGCTTCA
GCAGAGGCTTTGCCTCTGATGGACGTAGGACCATCCTGAGACCAGAAGTCGGAGAAGGTCATATTCAAGA
TCCCCCAGAGTCACAGGAACAGCGGGCCCGAGCCACTCTGCGAGAGCGCTACCTCCGCAGCCTCCTAGCC
ATGGTGGGGCACCCTGTGAGTTTCACGCTGCACGAAGGTGTGCATGTGACCGCCCAGTTTGGAGCCACAG
ACCTGGATGTGGCCAACTTCTACGTTTCCCAACTGCAGACTCCCATAGGTGTACAGGCCGAGGCCTTGCT
TCGATGTAGTGACATAATTTCCTATTCTTTCAAGCTGTAA

Translation (129 aa):
MQSPLTIPVPVPVLRLPRGPDGFSRGFASDGRRTILRPEVGEGHIQDPPESQEQRARATLRERYLRSLLA
MVGHPVSFTLHEGVHVTAQFGATDLDVANFYVSQLQTPIGVQAEALLRCSDIISYSFKL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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