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Report for CCDS21097.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21097.1 Public Mus musculus 7 Hspb6 23 108 98 CCDS HistoryNCBI Gene:243912Re-query CCDS DB by CCDS ID:21097.1Re-query CCDS DB by GeneID:243912See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21097.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000044048.7 ENSMUSP00000039172.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000044048.7Link to Ensembl Protein Viewer:ENSMUSP00000039172.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000044048Re-query CCDS DB by Protein ID:ENSMUSP00000039172
Original member Current member NCBI NM_001012401.3 NP_001012401.1 Accepted alive Link to Nucleotide Sequence:NM_001012401.3Link to Protein Sequence:NP_001012401.1Re-query CCDS DB by Nucleotide ID:NM_001012401Re-query CCDS DB by Protein ID:NP_001012401Link to BLAST:NP_001012401.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001012401.1 162 Q5EBG6 162 100% 0 0

Chromosomal Locations for CCDS 21097.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 30553335 30553532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30554262 30554384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30554469 30554636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (489 nt):
ATGGAGATCCCCGTGCCTGTGCAGCCTTCTTGGCTGCGCCGTGCTTCAGCTCCTTTACCAGGTTTCTCTG
CTCCGGGACGCCTCTTTGACCAGCGTTTCGGCGAAGGGCTGCTTGAGGCAGAGCTGGCTTCACTGTGCCC
TGCTGCGATCGCCCCCTACTATCTGCGCGCCCCCAGTGTGGCGTTACCCACAGCCCAGGTGTCCACGGAC
TCTGGGTATTTTTCCGTGCTGCTGGATGTGAAGCACTTCTTGCCAGAGGAAATCTCTGTCAAGGTGGTTG
ACGACCATGTGGAGGTCCATGCTCGGCACGAGGAGCGCCCGGATGAACACGGATTCATTGCTCGAGAGTT
CCACCGCCGATACCGCCTGCCTCCTGGTGTGGACCCTGCTGCTGTGACCTCAGCACTGTCTCCTGAGGGT
GTCCTGTCCATCCAGGCCACACCAGCGTCGGCCCAGGCCCAACTTCCGTCACCACCTGCTGCCAAGTAG

Translation (162 aa):
MEIPVPVQPSWLRRASAPLPGFSAPGRLFDQRFGEGLLEAELASLCPAAIAPYYLRAPSVALPTAQVSTD
SGYFSVLLDVKHFLPEEISVKVVDDHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEG
VLSIQATPASAQAQLPSPPAAK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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