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Report for CCDS21128.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21128.1 Public Mus musculus 7 Scgb2b2 23 108 98 CCDS HistoryNCBI Gene:381970Re-query CCDS DB by CCDS ID:21128.1Re-query CCDS DB by GeneID:381970See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21128.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000038835.4 ENSMUSP00000048540.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000038835.4Link to Ensembl Protein Viewer:ENSMUSP00000048540.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000038835Re-query CCDS DB by Protein ID:ENSMUSP00000048540
Original member Current member NCBI NM_207262.2 NP_997145.2 Accepted alive Link to Nucleotide Sequence:NM_207262.2Link to Protein Sequence:NP_997145.2Re-query CCDS DB by Nucleotide ID:NM_207262Re-query CCDS DB by Protein ID:NP_997145Link to BLAST:NP_997145.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997145.2 114 Q6UGQ3 114 99.1228% 0 1

Chromosomal Locations for CCDS 21128.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 31302782 31302842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 31303543 31303724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 31304722 31304823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (345 nt):
ATGAAGGGGACACTTCTTCTGCTGGCCTTGCTGGTGACTGGAGAGCTGGGCTTCCAGAGAACGGAAGCAT
GCATACCTTTCTTCGGCGTATATTTGGGTATTCTCTCTGGAAACAGGATTGGGTTACATACAGAACTTGC
TCCATTTGATCCTACTGTGGAGGAAAAGGAGGCTTTTGAAAAAATCCAGGACTGCTATGAGGAGGAAGGA
CTAAAAGCTAAGACTGAAGATATGAAATTGATGACAACTATACTCTTCAGCTCAGAATGCAGGTCGTACT
ATACCAAAGAAGTCTTGAAGAACATTCTGGTTAAGTTTTCCAAGAAATTAACCCATAGAAGTTAA

Translation (114 aa):
MKGTLLLLALLVTGELGFQRTEACIPFFGVYLGILSGNRIGLHTELAPFDPTVEEKEAFEKIQDCYEEEG
LKAKTEDMKLMTTILFSSECRSYYTKEVLKNILVKFSKKLTHRS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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