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Report for CCDS21197.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21197.1 Public Mus musculus 7 Klk1b16 23 108 98 CCDS HistoryNCBI Gene:16615Re-query CCDS DB by CCDS ID:21197.1Re-query CCDS DB by GeneID:16615See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21197.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000005933.3 ENSMUSP00000005933.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000005933.3Link to Ensembl Protein Viewer:ENSMUSP00000005933.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000005933Re-query CCDS DB by Protein ID:ENSMUSP00000005933
Original member Current member NCBI NM_008454.3 NP_032480.1 Accepted alive Link to Nucleotide Sequence:NM_008454.3Link to Protein Sequence:NP_032480.1Re-query CCDS DB by Nucleotide ID:NM_008454Re-query CCDS DB by Protein ID:NP_032480Link to BLAST:NP_032480.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032480.1 261 P04071 261 100% 0 0

Chromosomal Locations for CCDS 21197.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 44137319 44137364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44139391 44139550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44140514 44140800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44140896 44141032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44141406 44141561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (786 nt):
ATGTGGTTCCTGATCCTGTTCCTAGCCCTGTCCCTAGGAGGGATTGATGCTGCACCTCCTGTCCAGTCTC
GAATAGTTGGAGGATTTAAATGTGAGAAGAATTCCCAACCCTGGCAGGTGGCTGTGTACTACCACAAGGA
ACACATTTGCGGGGGAGTCCTGTTGGACCGCAACTGGGTTCTCACAGCTGCCCACTGCTATGTCGATGAG
TGTGAGGTTTGGCTGGGCAAAAACCAGTTATTCCAAGAGGAACCCTCTGCTCAAAACCGATTGGTCAGCA
AAAGCTTCCCTCACCCTGGCTTCAACATGACCCTCCTGACCTTTGAAAAGTTACCTCCTGGGGCTGACTT
CAGCAATGACCTGATGCTGCTCCGCCTCAGCAAGCCTGCTGACATCACAGATGTTGTGAAGCCCATCGAC
CTGCCCACAAAGGAGCCCAAGCTGGATAGCACATGTCTAGTGTCAGGCTGGGGCAGCATTACACCCACAA
AATGGCAAAAGCCAGATGATCTTCAGTGTATGTTCACCAAGCTCCTGCCCAATGAGAACTGTGCCAAAGC
CTACCTACTGAAAGTCACAGATGTCATGCTGTGTACAATAGAGATGGGTGAAGACAAAGGCCCTTGTGTG
GGTGACTCAGGAGGCCCACTGATTTGTGATGGTGTTCTCCAAGGAACCGTATCAATTGGCCCTGACCCAT
GCGGTATACCTGGTGTATCAGCCATCTACACCAACCTTGTTAAGTTCAACTCCTGGATAAAAGATACTAT
GATGAAAAATGCTTGA

Translation (261 aa):
MWFLILFLALSLGGIDAAPPVQSRIVGGFKCEKNSQPWQVAVYYHKEHICGGVLLDRNWVLTAAHCYVDE
CEVWLGKNQLFQEEPSAQNRLVSKSFPHPGFNMTLLTFEKLPPGADFSNDLMLLRLSKPADITDVVKPID
LPTKEPKLDSTCLVSGWGSITPTKWQKPDDLQCMFTKLLPNENCAKAYLLKVTDVMLCTIEMGEDKGPCV
GDSGGPLICDGVLQGTVSIGPDPCGIPGVSAIYTNLVKFNSWIKDTMMKNA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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