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Report for CCDS21639.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21639.1 Public Mus musculus 7 Or52e5 23 108 98 CCDS HistoryNCBI Gene:258753Re-query CCDS DB by CCDS ID:21639.1Re-query CCDS DB by GeneID:258753See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21639.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098160.1 ENSMUSP00000095763.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098160.1Link to Ensembl Protein Viewer:ENSMUSP00000095763.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000098160Re-query CCDS DB by Protein ID:ENSMUSP00000095763
Original member Current member EBI ENSMUST00000213622.1 ENSMUSP00000150213.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000213622.1Link to Ensembl Protein Viewer:ENSMUSP00000150213.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000213622Re-query CCDS DB by Protein ID:ENSMUSP00000150213
Original member Current member NCBI NM_146758.1 NP_666969.1 Accepted alive Link to Nucleotide Sequence:NM_146758.1Link to Protein Sequence:NP_666969.1Re-query CCDS DB by Nucleotide ID:NM_146758Re-query CCDS DB by Protein ID:NP_666969Link to BLAST:NP_666969.1

Chromosomal Locations for CCDS 21639.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 105069469 105070410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (942 nt):
ATGCTTCATTCCAACAAGACCCAGTTCCACCCTTCCTCCTTCCTCCTGATAGGGATCCCAGGGCTGGAAG
AGTTGCACCTGTGGATTGGCTTTCCCTTCTTTGCAGTGTATTTAATAGCTGTCTTGGGGAACATCATCAT
CTTATTTGTGATCCAAACTGAACGCAGCCTCCACCAACCCATGTTCTACTTCTTGGCCATGTTGGCATGC
ACTGATTTGGGCCTATCCACAGCTACTATCCCCAAGATGCTGGGTATTTTCTGGTTCAATCTCAGGGAGA
TTGCATTTGGAGCCTGCATCACTCAGATGTATATAATCCATACATGCACTGGCCTGGAGTCTGTGGTACT
GACAATTATGGCCATAGATCGATATATTGCTATATGTTACCCACTGAGGTACAGTATGATACTCACCAAC
AAAGTGATAGCTATTCTGGGTATAATCATCATAGTCAGGACTTTGATATTTGTGACTCCATTTATATTTC
TGATCTTGAGGTTGCCTTTCTGTGGTGTCCGGATTATTCCACATACCTACTGTGAACACATGGGTTTGGC
AAAGCTAGCATGTGCCAATATCAAGGTCAATGTTATTTATGGATTGGTCGCTTTCTCAGTGGGATACATT
GATCTGTCTGTGATTGGATTTTCCTACATCCGGATTCTCCAAGCAGTCTTCCGCCTTCCATCCTGGGATG
CTCGGCTTAAGGCACTAAGTACATGTGGCTCCCATGTCAGTGTCATGTTGGCATTTTACCTTCCAGCTCT
CTTCTCATTCATGACACACCGCTTTGGCCACAATATCCCTCACTACATCCACATACTTCTAGCCAACCTA
TATGTGGTTGTTCCTCCTGCCCTGAACCCTGTTATCTATGGAGTCAGGACAAAACAGATAAGGGAAAGAG
TACTAAGAATGCTTAACCCTAAGATGCACTGA

Translation (313 aa):
MLHSNKTQFHPSSFLLIGIPGLEELHLWIGFPFFAVYLIAVLGNIIILFVIQTERSLHQPMFYFLAMLAC
TDLGLSTATIPKMLGIFWFNLREIAFGACITQMYIIHTCTGLESVVLTIMAIDRYIAICYPLRYSMILTN
KVIAILGIIIIVRTLIFVTPFIFLILRLPFCGVRIIPHTYCEHMGLAKLACANIKVNVIYGLVAFSVGYI
DLSVIGFSYIRILQAVFRLPSWDARLKALSTCGSHVSVMLAFYLPALFSFMTHRFGHNIPHYIHILLANL
YVVVPPALNPVIYGVRTKQIRERVLRMLNPKMH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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