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Report for CCDS21694.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21694.1 Public Mus musculus 7 Or5p51 23 108 98 CCDS HistoryNCBI Gene:258417Re-query CCDS DB by CCDS ID:21694.1Re-query CCDS DB by GeneID:258417See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21694.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000073059.4 ENSMUSP00000072810.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000073059.4Link to Ensembl Protein Viewer:ENSMUSP00000072810.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000073059Re-query CCDS DB by Protein ID:ENSMUSP00000072810
Original member Current member EBI ENSMUST00000220193.1 ENSMUSP00000151543.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000220193.1Link to Ensembl Protein Viewer:ENSMUSP00000151543.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000220193Re-query CCDS DB by Protein ID:ENSMUSP00000151543
Original member Current member NCBI NM_146425.1 NP_666636.1 Accepted alive Link to Nucleotide Sequence:NM_146425.1Link to Protein Sequence:NP_666636.1Re-query CCDS DB by Nucleotide ID:NM_146425Re-query CCDS DB by Protein ID:NP_666636Link to BLAST:NP_666636.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_666636.1 314 Q8VF65 314 100% 0 0

Chromosomal Locations for CCDS 21694.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 107844787 107845731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGGCTTTCCTGGAGGATGGGAACCACACTGCAGTGACAGAGTTCGTTTTATTTGGATTAACAGATGATC
CAGTTCTTAGAGTCATCCTCTTCATCATCTTCCTGTGCATCTACCTGGTGAATGTGTCTGGGAACCTCAG
CACCATCCTTCTCATCAGAGTCTCTTCCCAGCTCCATCACCCCATGTACTTTTTTCTCAGCCACTTGGCT
TCTGTTGACGTAGGCTACTCATCTACTGTCACACCCAAAATGCTTGCCAACTTCCTGCTGGAGAGAAGCA
CAATCTCCTACCTTGGGTGTACCATCCAGCTTTTCTCAGGTGCTTTTGTTGGGACACTTGAGTGCTTCCT
TCTGGCCACCATGGCTTATGATCGTTTTATAGCAATCTGCAACCCATTGCTTTATTCCACCAAAATGTCC
ACACAAGTCTGTATCCAGTTGCTTGTAGGATCTTATATTGGTGGGTTTCTTAATGCTTCCTCCTTTCTCC
TTTCCTTCTTTCCTCTTCTCTTCTGTGGACCAAATAGAGTCAATCACTATTCCTGTGATTTGACTCCTTT
GATAGAGCTCTCCTGTTCAGGTAGCAATGTCCCCATAGTTCCTGCCTCATTTTGCTCTGCCTTTGTCATT
ATAGTCACAGTGTCTGTCATAGCCATCTCCTACACCTACATCCTCATCACCATCCTGAAGATGCGCTCCA
CTGAGGGCCGACAGAAGGCCTTCTCCACCTGCACTTCCCACCTCACTGCAGTGACTCTCTATTATGGAAC
TGTCACATTCATTTATGTGATGCCCAAATCCAGCTACTCCACGGACCAGAACAAGGTGGTGTCTGTGTTC
TACACAGTGGTAATCCCAATGTTGAACCCCATCATCTACAGCCTCAGGAACAATGAGATTAAGGGTGCTC
TGAAGAGACAGCTTGCTAGGAAAATATTCTCTTAA

Translation (314 aa):
MAFLEDGNHTAVTEFVLFGLTDDPVLRVILFIIFLCIYLVNVSGNLSTILLIRVSSQLHHPMYFFLSHLA
SVDVGYSSTVTPKMLANFLLERSTISYLGCTIQLFSGAFVGTLECFLLATMAYDRFIAICNPLLYSTKMS
TQVCIQLLVGSYIGGFLNASSFLLSFFPLLFCGPNRVNHYSCDLTPLIELSCSGSNVPIVPASFCSAFVI
IVTVSVIAISYTYILITILKMRSTEGRQKAFSTCTSHLTAVTLYYGTVTFIYVMPKSSYSTDQNKVVSVF
YTVVIPMLNPIIYSLRNNEIKGALKRQLARKIFS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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