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Report for CCDS21757.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21757.1 Public Mus musculus 7 Spon1 23 108 98 CCDS HistoryNCBI Gene:233744Re-query CCDS DB by CCDS ID:21757.1Re-query CCDS DB by GeneID:233744See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21757.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000046687.15 ENSMUSP00000041157.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000046687.15Link to Ensembl Protein Viewer:ENSMUSP00000041157.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000046687Re-query CCDS DB by Protein ID:ENSMUSP00000041157
Original member Current member NCBI NM_145584.2 NP_663559.1 Accepted alive Link to Nucleotide Sequence:NM_145584.2Link to Protein Sequence:NP_663559.1Re-query CCDS DB by Nucleotide ID:NM_145584Re-query CCDS DB by Protein ID:NP_663559Link to BLAST:NP_663559.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663559.1 807 Q8VCC9 807 100% 0 0

Chromosomal Locations for CCDS 21757.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 113766329 113766566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 113788446 113788552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 113836823 113836956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 113879177 113879250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 113886772 113886894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 113927712 113927860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 114016727 114016791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 114028901 114029102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 114030215 114030355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 114030773 114030848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 114031765 114031947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 114032936 114033106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 114033194 114033361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 114034155 114034319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 114036549 114036812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 114039801 114039964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2424 nt):
ATGAGGCTGTCTCCCGTGTCCCTGAGGCTTAGCCGGGGTCCGGCGCTGCTGGCCCTCGCGCTGCCCCTGG
CCGCAGCGCTAGCTTTCTCAGATGAGACCCTGGACAAAGTGACCAAGTCGGAGGGCTACTGCAGCCGCAT
CTTGCGCGCCCAGGGCACACGGCGTGAGGGATACACGGAGTTCAGCCTCCGCGTGGAAGGCGACCCTGAC
TTCTATAAGCCAGGAAGCAGCTACCGAGTGACACTTTCGGCTGCTCCTCCCTCCTACTTCAGAGGTTTCA
CGTTAATTGCCCTCAAAGAGAACCAGGAGGGAGATAAGGAAGAAGATCATGCAGGCACCTTCCAGATCAT
AGATGAGGAAGAGACCCAGTTTATGAGTAACTGTCCTGTGGCCGTCACTGAAAGCACCCCTCGGAGGAGG
ACACGGATCCAGGTGTTTTGGATAGCGCCACCAACAGGGACAGGCTGTGTGATTCTGAAGGCCAGCATTG
TACAGAAACGCATAATTTATTTTCAAGACGAGGGCTCCCTGACCAAGAAGCTGTGTGAACAGGATCCCAC
ACTTGATGGGGTGACGGACAGACCCATCTTAGACTGCTGCGCCTGTGGAACTGCCAAGTACAGACTCACG
TTTTATGGGAACTGGTCCGAGAAGACTCATCCGAAGGATTACCCTCGTCGGGCTAACCACTGGTCTGCCA
TCATTGGTGGGTCCCACTCCAAGAACTACGTGCTGTGGGAGTATGGAGGGTATGCCAGCGAAGGGGTCAA
GCAAGTTGCTGAACTGGGCTCACCAGTAAAAATGGAGGAAGAAATTCGACAACAGAGTGATGAAGTCCTC
ACTGTCATCAAAGCCAAAGCCCAGTGGCCAGCCTGGCAGCCTGTCAATGTGAGAGCAGCACCCTCAGCTG
AATTCTCAGTGGACAGGACACGCCACTTGATGTCCTTCCTCACCATGATGGGCCCCAGTCCAGACTGGAA
CGTGGGCCTATCTGCAGAGGATCTGTGCACCAAGGAGTGTGGCTGGGTCCAGAAAGTAGTGCAGGACCTG
ATTCCCTGGGATGCTGGCACTGACAGCGGCGTGACCTATGAGTCACCAAACAAGCCCACAATTCCTCAGG
AAAAAATCCGACCCCTGACTAGTCTGGATCATCCTCAGAGTCCTTTCTATGACCCAGAAGGTGGGTCCAT
CACACAAGTGGCCAGAGTCGTCATCGAGAGAATTGCCCGGAAGGGAGAACAGTGCAACATTGTACCTGAC
AACGTGGACGATATTGTAGCCGACCTGGCTCCAGAAGAGAAAGATGAAGATGACACCCCTGAAACCTGCA
TCTACTCCAACTGGTCCCCATGGTCGGCCTGCAGCTCTTCCACTTGTGAAAAGGGCAAGAGGATGCGGCA
GCGCATGCTGAAGGCACAGCTGGACCTCAGTGTCCCCTGTCCTGACACCCAGGACTTCCAGCCCTGCATG
GGCCCAGGCTGCAGCGATGAAGATGGCTCCACCTGTACCATGTCGGAGTGGATCACCTGGTCGCCCTGTA
GCGTCTCGTGCGGCATGGGCATGAGGTCCCGGGAGAGATACGTGAAGCAGTTCCCGGAAGACGGCTCAGT
GTGCATGCTGCCCACGGAGGAGACGGAGAAGTGCACAGTCAACGAGGAGTGCTCTCCTAGCAGCTGCCTG
GTGACTGAGTGGGGTGAGTGGGACGACTGCAGTGCCACCTGTGGGATGGGTATGAAGAAGAGGCACCGTA
TGGTCAAGATGAGCCCCGCGGACGGCTCCATGTGCAAGGCAGAGACATCGCAGGCGGAGAAATGCATGAT
GCCTGAGTGCCATACCATCCCGTGCTTGCTGTCTCCCTGGTCCGAGTGGAGCGACTGTAGCGTGACCTGT
GGGAAGGGCATGCGGACCCGCCAGCGGATGCTCAAATCTCTGGCAGAGCTGGGTGACTGTAACGAGGACC
TGGAGCAGGCGGAGAAGTGCATGCTGCCAGAATGCCCCATTGACTGTGAACTCAGCGAGTGGTCCCAGTG
GTCTGAATGTAACAAGTCATGTGGGAAAGGTCACATGATTCGAACCCGGACAATCCAAATGGAACCTCAG
TTTGGGGGTGTACCCTGCCCAGAGACTGTGCAACGCAAGAAGTGCCGCACCCGGAAATGCCTTCGCAGCC
CATCAGTCCAGAAGCTGCGCTGGAGGGAGGCCCGAGAGAGCAGGAGGAGTGAGCAGCTGAGAGAAGAGTC
AGATGGAGAGCAGTTCCCAGGCTGTCGAATGCGCCCGTGGACAGCCTGGTCAGAATGCACCAAACTGTGC
GGAGGTGGGATCCAAGAGCGCTACATGACTGTGAAGAAGAGGTTCAAAAGCTCCCAGTTTACCAGCTGCA
AAGACAAGAAGGAGATCAGAGCGTGCAACGTGCACCCTTGTTAA

Translation (807 aa):
MRLSPVSLRLSRGPALLALALPLAAALAFSDETLDKVTKSEGYCSRILRAQGTRREGYTEFSLRVEGDPD
FYKPGSSYRVTLSAAPPSYFRGFTLIALKENQEGDKEEDHAGTFQIIDEEETQFMSNCPVAVTESTPRRR
TRIQVFWIAPPTGTGCVILKASIVQKRIIYFQDEGSLTKKLCEQDPTLDGVTDRPILDCCACGTAKYRLT
FYGNWSEKTHPKDYPRRANHWSAIIGGSHSKNYVLWEYGGYASEGVKQVAELGSPVKMEEEIRQQSDEVL
TVIKAKAQWPAWQPVNVRAAPSAEFSVDRTRHLMSFLTMMGPSPDWNVGLSAEDLCTKECGWVQKVVQDL
IPWDAGTDSGVTYESPNKPTIPQEKIRPLTSLDHPQSPFYDPEGGSITQVARVVIERIARKGEQCNIVPD
NVDDIVADLAPEEKDEDDTPETCIYSNWSPWSACSSSTCEKGKRMRQRMLKAQLDLSVPCPDTQDFQPCM
GPGCSDEDGSTCTMSEWITWSPCSVSCGMGMRSRERYVKQFPEDGSVCMLPTEETEKCTVNEECSPSSCL
VTEWGEWDDCSATCGMGMKKRHRMVKMSPADGSMCKAETSQAEKCMMPECHTIPCLLSPWSEWSDCSVTC
GKGMRTRQRMLKSLAELGDCNEDLEQAEKCMLPECPIDCELSEWSQWSECNKSCGKGHMIRTRTIQMEPQ
FGGVPCPETVQRKKCRTRKCLRSPSVQKLRWREARESRRSEQLREESDGEQFPGCRMRPWTAWSECTKLC
GGGIQERYMTVKKRFKSSQFTSCKDKKEIRACNVHPC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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