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Report for CCDS21787.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21787.1 Public Mus musculus 7 Rexo5 23 108 98 CCDS HistoryNCBI Gene:434234Re-query CCDS DB by CCDS ID:21787.1Re-query CCDS DB by GeneID:434234See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21787.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033218.14 ENSMUSP00000033218.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033218.14Link to Ensembl Protein Viewer:ENSMUSP00000033218.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000033218Re-query CCDS DB by Protein ID:ENSMUSP00000033218
Original member Current member NCBI NM_001004187.1 NP_001004187.1 Accepted alive Link to Nucleotide Sequence:NM_001004187.1Link to Protein Sequence:NP_001004187.1Re-query CCDS DB by Nucleotide ID:NM_001004187Re-query CCDS DB by Protein ID:NP_001004187Link to BLAST:NP_001004187.1

Chromosomal Locations for CCDS 21787.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 119794380 119794502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119799565 119799677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119801230 119801356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119802741 119802837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119805143 119805286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119818383 119818471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119819432 119819547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119823756 119823894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119827303 119827376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119828092 119828206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119832671 119832775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119834264 119834401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119848732 119848791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1440 nt):
ATGGAGCAAGAGAAGGAGGAGGCGAACTCCAGGAAGAGGAAGGAGGCCCCGAACTCCTCGGCCTCGGCTA
CAGAGCGGGATGGACCTCCTTCGCATATTCAGGACCGCGAGCCACAAGCCAAGAAAGCTCGCTTATCTAC
CATTTTATTTACTGACAACTGTGAAGTAACCCATAGACAGCTGTGTGAGTTGCTGAAGTATGCAGTTCTG
GGTAAATCTGCTGTTCCTAAACCCAGCTGGTGCCAGCTTTCACACCAAAAACAACTAAACAACGTGGTGG
TTTTTATTCTGAAGGGAATGAGTCAGCTACATTTCTACAGGTTCTATTTGGAATTCAGATTTCTCCGAAA
GACATTCAGACATAAATTCAGCTTGCCTTCTCCAACATCTAGTTTTCTATTTGATATCATTGGGCTGCAG
AAGAAAAAATCAGCTAGAAGTTTTCGTAGGACTGTCGAAGGACCTCTAATTTCTGCCACTTTAAGATCCA
GCATCGACCTACAGAATGACCCCATCATTCAAAAGTATGGCTATAAGAACGTGGGCTTGACTAAATGCCT
TCTGACAAAGGAAGAAATGAAAACATTTCACTTCCCCTTACCAGGGTCTCCTAACTATGAAAACTTTATC
CTTACCAAGTATACTGGTTTCATAACAGATAGCAGTCCCCTCTTTGGACTTGACTGTGAAGTGTGCCTTA
CATCCATGGGGAAAGAACTAACACGCATCTCACTGGTTACTGAAGGAGGCTACTGTCTTATAGATGAACT
TGTCAAGCCTGATCTCAAGATTCTGGATTACCTTACCAGTTTTACAGGAATCACGAAGGAGATTCTTAAC
CCAGTGACAACAAAACTCAAAGATGTACAGAAGCTGTTAAGAGAACTGCTTCCTCCTGATGCTGTGTTAG
TGGGCCATTGCCTAGACTTGGATCTCAGAGTATTAAAAATTGCAGAGTTCAATCTGGAGGCACTAGCAGC
CAATCAGGAGCAAGGAGACAAGGAAGAAGCTGCACATATGAGTGTTTTAAAATGCCTGGAGTCAATGGGT
CAGAAACTCCTTTTCTTGACCCAGGATATAAATGAGCTTTCTTCTTATAGAAATTGTCAAACTATTAAAT
GCTCTTCAAATAAAAAGGTGCTTGAGCAGGCCAGGGTGGAAGTCCCTTTGTTCCCCTTCAATATTGTGGA
GTTCTCTTTTCAGCCCTTTCCACCCCTCTTCGCTGAGGAGATGAAAAACAGTATGAAGACCAAGTGGACA
CAAATGTCAACTGTCTATGCTGGGCCATTTAGCAAAGATTGTAACGTCGGGGCTCTGAAGAAGGTGTTTA
GTAGCTTGGGCCCAGTACACTCAATCACTCTTGTTCTTGAAACTTACAGGTGCTTTTGGGTCGCACCCTG
GCCTAGGACTGATGAAAATAAAAGAGGAAGAAGAAAGTGA

Translation (479 aa):
MEQEKEEANSRKRKEAPNSSASATERDGPPSHIQDREPQAKKARLSTILFTDNCEVTHRQLCELLKYAVL
GKSAVPKPSWCQLSHQKQLNNVVVFILKGMSQLHFYRFYLEFRFLRKTFRHKFSLPSPTSSFLFDIIGLQ
KKKSARSFRRTVEGPLISATLRSSIDLQNDPIIQKYGYKNVGLTKCLLTKEEMKTFHFPLPGSPNYENFI
LTKYTGFITDSSPLFGLDCEVCLTSMGKELTRISLVTEGGYCLIDELVKPDLKILDYLTSFTGITKEILN
PVTTKLKDVQKLLRELLPPDAVLVGHCLDLDLRVLKIAEFNLEALAANQEQGDKEEAAHMSVLKCLESMG
QKLLFLTQDINELSSYRNCQTIKCSSNKKVLEQARVEVPLFPFNIVEFSFQPFPPLFAEEMKNSMKTKWT
QMSTVYAGPFSKDCNVGALKKVFSSLGPVHSITLVLETYRCFWVAPWPRTDENKRGRRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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