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Report for CCDS22061.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22061.1 Public Mus musculus 8 Pex11g 23 108 98 CCDS HistoryNCBI Gene:69129Re-query CCDS DB by CCDS ID:22061.1Re-query CCDS DB by GeneID:69129See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22061.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000004686.12 ENSMUSP00000004686.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000004686.12Link to Ensembl Protein Viewer:ENSMUSP00000004686.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000004686Re-query CCDS DB by Protein ID:ENSMUSP00000004686
Original member Current member NCBI NM_026951.3 NP_081227.1 Accepted alive Link to Nucleotide Sequence:NM_026951.3Link to Protein Sequence:NP_081227.1Re-query CCDS DB by Nucleotide ID:NM_026951Re-query CCDS DB by Protein ID:NP_081227Link to BLAST:NP_081227.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081227.1 241 Q6P6M5-1 241 100% 0 0

Chromosomal Locations for CCDS 22061.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 3459200 3459434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3460272 3460334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3463922 3464100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3465783 3465971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3467572 3467631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (726 nt):
ATGGCTCTGCTGAACCGTCTGGCTTCCGCGCTGGAGTCCCACCGGGTCCGGGACCGCCTGATCCGGACAC
TGGGGTATTGCTGCCAGCTGATCGGTGGGGTCCTAGTGGAACAATGCCCCAACAGGTCCGAAGTGGGAAG
GCGCTTGCTGGTGGTGTCAGCCCAGTTCAATCATTGCAGGACTGTCTTGAGACTCTTTGATGACCTGGCC
ATGTTTGTCTACACTAAGCAGTATGGCCTGGGAACAAAGGAGGAGGACATCTTCATCCGATGGCTGTCTG
TCCTGAGTAATGTGACTGACCAACTGTACTATCCTTGTGAGCATATCGCCTGGGCTGCCGATGCCAAGGT
CCTCCGGGTGGACTCTGCTTGGTGGTGGACACTGAACACAGCCCTCTGGACTCTCTCTCTACTTCTTGGA
GCTGTCAAGGCCCTGTGGACAATGCTGAAGCTTAGACAGAAGCTGCGGAGCCCCACAGGCACCTCTGCAA
GCCAGCTGCCCAGGAGCAAGCGGAGGGCCATGGAGGCAAGGATATGCTCAGAGGTTTTAACTCTACTCAG
CAACCTGGCTGACCTGGCAAATGCTGTGCACTGGTTGCCCCGAGGTGTCCTGTGGGCTGGCCGCTTCCCT
CCTTGGCTGGTGGGTCTCATGGGCACCATCTCCTCCATCCTCAGCACATGCCAAGCTGTCAGGGCTGGCA
GACAGGCCGAGGCAGACAGCCCTTGA

Translation (241 aa):
MALLNRLASALESHRVRDRLIRTLGYCCQLIGGVLVEQCPNRSEVGRRLLVVSAQFNHCRTVLRLFDDLA
MFVYTKQYGLGTKEEDIFIRWLSVLSNVTDQLYYPCEHIAWAADAKVLRVDSAWWWTLNTALWTLSLLLG
AVKALWTMLKLRQKLRSPTGTSASQLPRSKRRAMEARICSEVLTLLSNLADLANAVHWLPRGVLWAGRFP
PWLVGLMGTISSILSTCQAVRAGRQAEADSP


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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