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Report for CCDS22269.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22269.1 Public Mus musculus 8 Adam26a 23 108 98 CCDS HistoryNCBI Gene:13525Re-query CCDS DB by CCDS ID:22269.1Re-query CCDS DB by GeneID:13525See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22269.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000049577.2 ENSMUSP00000058256.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000049577.2Link to Ensembl Protein Viewer:ENSMUSP00000058256.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000049577Re-query CCDS DB by Protein ID:ENSMUSP00000058256
Original member Current member NCBI NM_010085.3 NP_034215.2 Accepted alive Link to Nucleotide Sequence:NM_010085.3Link to Protein Sequence:NP_034215.2Re-query CCDS DB by Nucleotide ID:NM_010085Re-query CCDS DB by Protein ID:NP_034215Link to BLAST:NP_034215.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034215.2 697 Q9R158 697 100% 0 0

Chromosomal Locations for CCDS 22269.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 43568358 43570451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2094 nt):
ATGTTCCTTAAGTTCTGCCTGTGGACGATGTTCTTCTTCTCTGCATGGTCACCAATTGGACATGCTAAGT
ACAGTAGCCTTCTAGAAGTAGTGACACCCTTGAGGGTCACTGTCACTAGAGGAAATAATATTTCACCAGG
TTGGCTGTCCTATAGCCTGAACATTGGGGGGCAGAGGCACATAATCACTATGAAACCCAAGAAAAACTTG
ATATCCAGAAACTTCTTATTATTCACTTATAGTGACCAAGGTGATCTCCTTGAACAACACCATTTTGTGC
AGAATGACTGCTATTACCATGGCTATGTGGATGAAGACCTAGAGTCCCCGGTCATTGTCAACACCTGTTT
TGGAAGTTTGCAAGGCACACTAGAGATAAATGGCACAAGTTATGAAATCATGCCCAAGAGCTCAACGTCA
ACATTTGAACATCTGGTTTACAAAATGGACAGTGGGGATTCAGAATCATCTCCCATGAGATGTGGGTTAT
CAGAAGAGGAAACAGCACAACAAACGAAGCTACAAGAAAGCAATGCCCCCACACTTTTACAAATTCCCTA
TGAGAATTGGTGGACCCACCACAGGTTTATTGAATATTTTGTAGTACTAGACCATAAACAATATGTTCAT
AGAAATAACAATATCACAACTTGTATTCAAGATATGTTGCAAATAGTCAATGGAGTAAATGGTTATTATC
TTCAAATAGATACTGATGTGGTTTTAACCACTCTTGAAGTATGGAATGAAAAAAACTATATCAATGTAGA
ACTCAGTATATTTAAAGTCCTTGGTGATTTCTGTACTTGGAAGCAAAACATGTTTGGCAATCGCATTAGA
CATGATATCATACACCTTTTAGTCAGACAGGGATATGGTTTATATTTAGGGTTAGCTTATTTAGCTGACG
TTTGTACACCTTATAATTGTGGAGTTAGCAGTGTCCTTTCTGATGTAATGTCAGACATGGCACACATTGT
AGCACACGAGATGGGGCATAACTTCGGTATGAAACATGATGGAATTGGATGTACTTGTGGGTTAAAAGAC
TGTCTAATGGCCCCATATAAAACAAATTCTCCAAAATTCAGCAACTGTAGTTATGAAGAAATGTATTCAG
TTGTTACCAAACGAAGTTGCTTATATGATATTCCAGAAGCACTAGTAACAAACCTGACCGTGTGTGGGAA
TAAGGTGGTTGAAGAAGGAGAGCAGTGTGATTGTGGGAACTCTGAATCCTGTTTACAAGATCCTTGCTGT
AGCAGCGACTGTGTTCTCAAACCTGGTGCTCAATGTGCTTTTGGACTTTGTTGCAAAAATTGCCAGTTCC
TTAAAGCAGGCACTGTGTGTAGAAAAGAGAAAAATGAGTGTGACCTTCCAGAGTGGTGCAATGGAACTTC
AGCTGAGTGTCCAGGAGATGTGTATAAAGCAGACGGAATCCCTTGCAGTGGTGAGGGCTATTGCTATAAA
ATGGAATGTCATCAACGTGATGAGCAGTGTCGGAAGATTTTTGGCAATGGAAGTAGAAGTGCAGATGAAA
TTTGCTACATGGAAATGAACAGACAGGGTGACCGCTTTGGGAACTGTGGCAATGATAGCTCTACATATAG
AACATGCCAAATTGCTGATGTACTCTGTGGGCAAATTCAGTGTGAGAATGTGATACAACTTCCCCAAAGG
AGAAACCATGAAACAGTGCATTATACTCACTTCAGTAATATCACCTGCTGGACTATGGACTATCATTTTG
GGATCACCATAGATGATATTGGAGCTGTGAGCGATGGCACAGCTTATGCTCCAGACCATATATGTGTTGA
CAGAAAGTGTGTCAGCAAGTCTGTTCTGGTAAGTAACTGTTCACCACAGTTATACCATATGCAAGGAATC
TGCAATAATAAACAACACTGCCATTGTGGTGTCACATGGAAACCACCAGACTGTCAAAAACGTGGCCATG
GAGGTAGTATAGACAGTGGACCACCTCCATTGCCTTTATCTCATTCCAAATGGATTGTGTACATCCTTAT
TGTTTTAGATGTGTGTATTGTTATCATAATTTATTTATTTTCTTTTTATAAGTTAAGCAAATAA

Translation (697 aa):
MFLKFCLWTMFFFSAWSPIGHAKYSSLLEVVTPLRVTVTRGNNISPGWLSYSLNIGGQRHIITMKPKKNL
ISRNFLLFTYSDQGDLLEQHHFVQNDCYYHGYVDEDLESPVIVNTCFGSLQGTLEINGTSYEIMPKSSTS
TFEHLVYKMDSGDSESSPMRCGLSEEETAQQTKLQESNAPTLLQIPYENWWTHHRFIEYFVVLDHKQYVH
RNNNITTCIQDMLQIVNGVNGYYLQIDTDVVLTTLEVWNEKNYINVELSIFKVLGDFCTWKQNMFGNRIR
HDIIHLLVRQGYGLYLGLAYLADVCTPYNCGVSSVLSDVMSDMAHIVAHEMGHNFGMKHDGIGCTCGLKD
CLMAPYKTNSPKFSNCSYEEMYSVVTKRSCLYDIPEALVTNLTVCGNKVVEEGEQCDCGNSESCLQDPCC
SSDCVLKPGAQCAFGLCCKNCQFLKAGTVCRKEKNECDLPEWCNGTSAECPGDVYKADGIPCSGEGYCYK
MECHQRDEQCRKIFGNGSRSADEICYMEMNRQGDRFGNCGNDSSTYRTCQIADVLCGQIQCENVIQLPQR
RNHETVHYTHFSNITCWTMDYHFGITIDDIGAVSDGTAYAPDHICVDRKCVSKSVLVSNCSPQLYHMQGI
CNNKQHCHCGVTWKPPDCQKRGHGGSIDSGPPPLPLSHSKWIVYILIVLDVCIVIIIYLFSFYKLSK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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