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Report for CCDS22577.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22577.1 Public Mus musculus 8 Cmtm3 23 108 98 CCDS HistoryNCBI Gene:68119Re-query CCDS DB by CCDS ID:22577.1Re-query CCDS DB by GeneID:68119See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22577.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034343.4 ENSMUSP00000034343.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034343.4Link to Ensembl Protein Viewer:ENSMUSP00000034343.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000034343Re-query CCDS DB by Protein ID:ENSMUSP00000034343
Original member Current member EBI ENSMUST00000212081.1 ENSMUSP00000148682.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000212081.1Link to Ensembl Protein Viewer:ENSMUSP00000148682.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000212081Re-query CCDS DB by Protein ID:ENSMUSP00000148682
Original member Current member NCBI NM_024217.3 NP_077179.1 Accepted alive Link to Nucleotide Sequence:NM_024217.3Link to Protein Sequence:NP_077179.1Re-query CCDS DB by Nucleotide ID:NM_024217Re-query CCDS DB by Protein ID:NP_077179Link to BLAST:NP_077179.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_077179.1 184 Q99LJ5 184 100% 0 0

Chromosomal Locations for CCDS 22577.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 104340749 104340895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104343758 104343913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104344777 104344872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104345272 104345392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104346732 104346766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (555 nt):
ATGTGGCCCCCGGACGCAGAGCCAGAGCCCGATCCAGAGTCCGCGCATGGCCCCCGAAGTGGCAGGACAG
TGCCGGGACTCCGAGCCCTGTTGCCCGCGCGCGCCTTCCTCTGCTCTCTCAAAGGCCGCCTCCTGCTGGC
CGAGTCGGGTCTTTCATTCATCACCTTCATCTGCTACGTGGTGTCCTCCGCATCTGCCTTCCTCACAGTG
CCTCTGCTGGAGTTTCTGTTGGCCGTTTACTTCCTCTTTGCTGATGCCATGCAGCTGAATGACAAATGGC
AGGGTTTGTGCTGGCCCATGATGGACTTCCTGCGCTGTGTCACCGCTGCCCTCATCTACTTCGTCATCTC
CATCACTGCTGTCGCCAAATACTCAGATGGGGCTTACAAAGCAGCTGGAGTTTTTGGCTTTTTTGCCACA
ATTGTGTTCGCAATTGACTTCTACCTGATCTTTAATGAAGTGGCCAAATTCCTCAAGCAAGGAGACTCTG
GGAATGAGACCACAGCCCATAGGACAGAAGAAGAGAACTCCAACTCGGACTCAGACTCTGACTAA

Translation (184 aa):
MWPPDAEPEPDPESAHGPRSGRTVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYVVSSASAFLTV
PLLEFLLAVYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFVISITAVAKYSDGAYKAAGVFGFFAT
IVFAIDFYLIFNEVAKFLKQGDSGNETTAHRTEEENSNSDSDSD


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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