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Report for CCDS22660.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22660.1 Public Mus musculus 8 Zfp612 23 108 98 CCDS HistoryNCBI Gene:234725Re-query CCDS DB by CCDS ID:22660.1Re-query CCDS DB by GeneID:234725See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22660.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000212754.1 ENSMUSP00000148717.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000212754.1Link to Ensembl Protein Viewer:ENSMUSP00000148717.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000212754Re-query CCDS DB by Protein ID:ENSMUSP00000148717
Original member Current member NCBI NM_175480.4 NP_780689.3 Accepted alive Link to Nucleotide Sequence:NM_175480.4Link to Protein Sequence:NP_780689.3Re-query CCDS DB by Nucleotide ID:NM_175480Re-query CCDS DB by Protein ID:NP_780689Link to BLAST:NP_780689.3

Chromosomal Locations for CCDS 22660.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 110082719 110082742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110083657 110083783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110084344 110084451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110088422 110090181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2019 nt):
ATGATCCCATCGGTTTGGCCCCAGAAGTCGGTGACCTTTGAGGACGTGGCTGTGTACTTCACCCAGACGG
AATGGGATGGTCTGTCTCCTGGGCAGAGAGCGCTGTACAGGGATGTCATGCTGGAGAACTATAGGAACCT
GGCCTCTGTAGGATTTCCACTTCTCAAACCTGCTGTGATCTCACAGCTAGAGGAACGAAAGGATCTGGAA
AACCTGTTTCAGCTGGCCACTGGAACGGACTCCCAGGGCCTCTGGACTGAATGTACTGCTGTCCAGTCCG
GCAATAATCTGACAAAAGAAGTGCATGAAGAAGAAAAGAGTACATTATTTGAACTTCAGAAGGACTTTTC
TCAGGAAACAAACTTTTCAAAAACGTATATTTTGGGCCAACAACAGGAAATCCGGTCAGCAGGAAGTGAG
AGGGGGAGTGCCAGTGCCACCGATGGAAGAGCTAAGGCGAGCTCTGTGGAAGGGTGTTTGTTTAGTCAGA
CTCCACAATTGTCCCAGGATCATACCAGCTCCACTGGAGAGCTATATTCTGATACCAAACTTAGTAAGAG
TGAAAGAATCACTACAGAGGAAAGACCTCTGAAACCCAGAGAATTAGCAGAGGCTTCTCAAGGCAGCCCT
CAAGTTAATCAGCTTCCAGAGATCTGTGATGTGGAGAAGCCCTACCAGTGTGCAGAATGTGGCAAAGCCT
TCAGTGTTAAAGCCAAGTTCGTCTGGCATCAGAGACTTCATAATGGAGAGAAACCTTTCAAATGTGTGGA
ATGTGGGAAGTGCTTCAGCTACAGTTCCCACTACATCACACATCAGACAATCCACAGTGGAGAGAAGCCT
TATCAGTGTAAGGTATGCGGCAAGGCCTTCAGTGTTAATGGAAGTCTCGTTAGACACCAGAGGATCCACA
CAGGAGAGAAGCCGTATCAGTGCAAGGACTGCGGGGCTGGCTTCGGCTGCAGTTCTGCGTACATTACTCA
TCAGAGAACCCACACTGGAGAGAAGCCTTACGAGTGTAGTGACTGTGGGAAAGCCTTCAATGTTAACGCA
AAACTGATTCAGCATCAAAGAATTCACACTGGAGAGAAGCCTTATGAGTGCGATGTGTGCGGGAAGGGCT
TCCGGTGCAGCACCCAGCTTAGGCAGCATCAGAGTATACACACTGGGGAAAAGCCGCATCGCTGCAGCGA
GTGTGGGAAAGGCTTCACTAAAAATGCAAAGCTCATTCAACATCAGCGAGTGCACACGGGGGAGAAGCCC
TACGCCTGCAGTGACTGCGGAAAGACTTTCAGTGCCAAAGGGAAGCTGATCCAGCACCAGAGGATCCACA
CGGGCGAGCGGCCGTATGAATGCAGTGAGTGTGGGAAGTCTTTCAGGTGTAACTCCCAGCTTCGGCAGCA
TCTGAGAATCCATACTGGGGAGAAGCCATATAAGTGCAGTGAGTGTGGCAAGGCCTTCAACGTCAATGCG
AAGCTGATGCAGCACCGGAGAACCCACACCGGGGAGAAGCCCTTCGAATGCAAGGAGTGCGGGAAATGCT
TTACTTCTAAAAGAAACCTGCTGGATCACCAGCGAGCCCACACCGGAGAAAAGCCGTATCAATGTAGCGA
GTGTGGGAAAGCTTTCAGTATCAATGCCAAGTTAACCAGACATCAGCAAATACATACCAGGGAGAAGCCT
TTCAAGTGTATGGAATGCGAGAAAGCGTTCAGCTGTAGCTCTGACTATATTGTGCACCAGAGGATCCACA
CTGGAGAGAAACCCTTTCAGTGTGGCGAGTGTGGCAAAGCCTTCCACGTCAATGCTCACTTAATTAGACA
CCAGAGAAGCCATACTGGGGAGAAACCTTTCCGGTGCACAGAATGTGGCAAGGGCTTCAGCCTTAGTTCT
GACTGTATTATACATCAGACTGTCCATACTTGGAAGAAACCCTATGTATGTAACGTATGTGGGAAAACTT
TCAGGTTTAGCTTCCAACTAAGCCAGCACCAAGATGTTCACAATGAAGACAAATCCTAA

Translation (672 aa):
MIPSVWPQKSVTFEDVAVYFTQTEWDGLSPGQRALYRDVMLENYRNLASVGFPLLKPAVISQLEERKDLE
NLFQLATGTDSQGLWTECTAVQSGNNLTKEVHEEEKSTLFELQKDFSQETNFSKTYILGQQQEIRSAGSE
RGSASATDGRAKASSVEGCLFSQTPQLSQDHTSSTGELYSDTKLSKSERITTEERPLKPRELAEASQGSP
QVNQLPEICDVEKPYQCAECGKAFSVKAKFVWHQRLHNGEKPFKCVECGKCFSYSSHYITHQTIHSGEKP
YQCKVCGKAFSVNGSLVRHQRIHTGEKPYQCKDCGAGFGCSSAYITHQRTHTGEKPYECSDCGKAFNVNA
KLIQHQRIHTGEKPYECDVCGKGFRCSTQLRQHQSIHTGEKPHRCSECGKGFTKNAKLIQHQRVHTGEKP
YACSDCGKTFSAKGKLIQHQRIHTGERPYECSECGKSFRCNSQLRQHLRIHTGEKPYKCSECGKAFNVNA
KLMQHRRTHTGEKPFECKECGKCFTSKRNLLDHQRAHTGEKPYQCSECGKAFSINAKLTRHQQIHTREKP
FKCMECEKAFSCSSDYIVHQRIHTGEKPFQCGECGKAFHVNAHLIRHQRSHTGEKPFRCTECGKGFSLSS
DCIIHQTVHTWKKPYVCNVCGKTFRFSFQLSQHQDVHNEDKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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